Lycium barbarum (goji berry): 132621665
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Entry
132621665 CDS
T09483
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03420
Nucleotide excision repair
lbb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132621665
09124 Replication and repair
03420 Nucleotide excision repair
132621665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lbb03051
]
132621665
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132621665
Proteasome [BR:
lbb03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
132621665
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
132621665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
Dsc3_N
UBA_RAD5A
CUE
TECR_N
Ubiquitin_4
Crinkler
UBA_3
Permuted_GreAB-C
Motif
Other DBs
NCBI-GeneID:
132621665
NCBI-ProteinID:
XP_060191987
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All DBs
Position
12:complement(58311889..58321114)
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AA seq
381 aa
AA seq
DB search
MKIFVKTLKGTHFEIEVKPEETVADVKKSIETAQGQDVYPAAQQMLIHQGKVLKDTTTLE
ENKVAENSFVVVMLSKNKVSTSGSSATQPAPSNSAQPATSTGQSTQTVTAAQAPAANVAP
AQSAPESAPTPAAAPATANPVTDVYGQAASNLVAGNTLEATVQQILDMGGGSWDRDTVVR
ALRAAFNNPERAIEYLYSGIPEQAEIAPAAPASGQAVNPPVQASQPAVPSGGPNANPLDL
FPQGLPNVGSNAGAGNLDFLSNSPQFQALRAMVQANPQILQPMLQELGKQNPQLMRMIQE
HQADFLRLINEPVEGEGNVPGQPAGAIPQAVTVTPEEREAIERLEAMGFDRALVLQVFFA
CNKNEELAANYLLDHMHEFDE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttgtgaagactctgaaaggcacgcacttcgagatcgaagtgaaacccgaa
gaaacagttgctgatgtgaagaaaagcatagaaacagctcaaggtcaagatgtctacccc
gctgcacagcagatgcttatccaccagggtaaagttctcaaggacactacaacattggag
gaaaacaaagttgctgaaaatagttttgtcgttgtaatgctttccaagaataaggtttca
acaagtggaagctcagctacacagccagcaccttcaaattcggcccaacctgcaacatcc
acaggccaatctacgcagacagtaacagcagctcaagcacctgcggcaaatgtggcacct
gcacaatctgctcctgagtctgctcctactcctgctgctgcgccagctactgctaatcct
gtgacagatgtgtatggccaagcggcatcaaatcttgttgctggaaataccttggaagct
acggttcaacaaattcttgatatgggtggtggaagttgggatagggatactgttgtgcgt
gctctacgtgctgcatttaacaatccagagagagctattgaatacctgtactccggtatt
cctgagcaagcagaaattgcacctgccgctcctgccagcggacaggcagtaaatcctcca
gttcaggcctcacagccagcagttccgtccggtgggccaaatgctaatcctttggacctc
tttcctcagggccttccaaatgtgggttcaaatgctggagctggaaatttagatttctta
agcaatagtccccagtttcaagcccttcgagcaatggtgcaagcaaacccacagatattg
cagcctatgctccaggagttgggtaagcaaaatcctcaattgatgcggatgattcaagaa
catcaagctgactttttgcgcctcatcaatgaacctgttgagggggaggggaatgtgccc
gggcagccggcaggggctataccacaagctgtgactgtcacacctgaagagcgtgaggct
attgaacgacttgaagctatgggtttcgatcgagctttggtgttgcaagtattttttgca
tgcaacaaaaatgaggagctggctgcaaactatctgttagatcacatgcatgagtttgat
gaatga
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