Lycium barbarum (goji berry): 132621686
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Entry
132621686 CDS
T09483
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbb03000
]
132621686
03036 Chromosome and associated proteins [BR:
lbb03036
]
132621686
Transcription factors [BR:
lbb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
132621686
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
132621686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
YL1
Motif
Other DBs
NCBI-GeneID:
132621686
NCBI-ProteinID:
XP_060192018
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All DBs
Position
12:102927384..102935805
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AA seq
637 aa
AA seq
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MTDGHLFNNISLGGRGGTNPGQLKVQSGGILWKKQGGGKAVEVDKDDIVGLTWMKVPRSN
QLGVRIKDGLYYKFTGFRDQDVVSLTTYFQNSCGISPEEKQLSVSGKNWGEVDLNGNMLA
FLVGSKQAFEISLADVSQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFDGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRIFLLPKHNQPHTLVVITLDPPIRKGQTLYPHIVLQFETDNVVDLSLALS
EDLLNTKYKDRLLMGYKGLIHDIFTQILRGLSGAKVTKPGKFRSSQDGYAVKSSLKAEDG
LLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGTANMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFINSKGLKIMNLNEARATEGVPVLPDDDDDAVDPHLERIKNEAGGDDSDEE
DEDFVLDKDDGGSPTDDSGGDESDASGSGDEEKPAKKKPKKEVTSKPSTSRKKADDDGSK
KKKQKKKKDPNAPKRAISAFMFFSQSERENVKKSNPGISFTDVGKVLGERWNKLSAEEKE
PYEAMAKADKKRYSDQISGYKNPQPTAVDSGNDSGSS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggtcacttgttcaacaacatctccctcggcggccgtggaggcaccaatcca
gggcagctcaaggttcagtctggaggtatattatggaagaaacaaggtggtggtaaggct
gtggaagtggacaaggatgatatagtgggccttacttggatgaaggttcctcgatctaat
cagctgggtgtgcggattaaggatggtctttactacaaatttactggctttcgtgaccag
gatgttgtgagtttgaccacctatttccagaattcttgcgggatatctccggaggaaaag
cagctatcagttagtgggaaaaattggggagaagttgatctaaatgggaatatgcttgct
tttcttgttggttcgaagcaagcatttgagatatcattagcagatgtttctcaaacacag
cttcaaggaaaaaatgatgttatgttggagttccatgtagatgatacaactggagctaat
gagaaagactcgctgatggaaatcagctttcacatccctaattcaaacactcaatttgtt
ggtgatgaaaaccgacctcctgctcaagtttttcgtgacaaaatcatgtcaatggctgat
gtgggtgctggaggcgaggaagctgttgtcacatttgacggcattgctattcttactcca
aggggtcgttacaatgttgagcttcatctctcattcttgcgcttgcaagggcaagccaat
gactttaaaattcagtacagcagcgtagtccgtatttttttgttgccgaagcataatcaa
ccgcacactttagtagttatcactcttgatcctccaattaggaagggccaaactttgtat
ccgcacattgtattgcagtttgagactgacaatgtggtagacctttcgctggctctaagc
gaagatcttttaaatacgaaatacaaggataggctgctaatgggttacaagggtcttatc
catgacatttttactcaaattttacggggcttgtccggtgccaaagtcactaaaccaggg
aagtttcgtagcagtcaagatgggtatgcggtgaagtcctcattgaaagctgaagatgga
ctcctctatcctctggagaagagcttcttcttcttacctaaaccaccaactcttatactg
catgaggagattgattatgtggagtttgagaggcatgctgcgggaacagcaaacatgcat
tactttgatcttctcattagactgaagactgaacaagaacatcttttccggaatatccag
agaaatgagtaccacaatctttttgatttcatcaattcaaagggtttgaaaataatgaac
cttaatgaagctcgggctacagaaggtgttcctgttttgcccgatgatgacgatgatgct
gttgatccgcatcttgagcgcattaagaatgaagcaggtggagatgatagtgatgaagag
gacgaagattttgtcctcgataaggatgatggagggtctcctactgatgattctggaggg
gatgaatctgatgccagtggtagcggtgatgaggagaaacctgcaaaaaagaagcccaaa
aaggaggtaacttcaaagccgtctacaagcaggaaaaaggcagatgatgatgggtcgaag
aagaaaaaacagaaaaagaagaaggatccaaatgccccaaagagggcaattagtgctttt
atgttcttctcgcagagtgaaagagagaatgtgaagaaaagtaatcctggaatctccttc
actgacgttgggaaggttcttggagagagatggaacaagctgtcagctgaggagaaagaa
ccctatgaggcaatggctaaggcagataagaaacgctacagcgatcagatcagtggttac
aagaaccctcagccgactgccgtggattcagggaatgattctgggagttcctaa
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