KEGG   Lycium barbarum (goji berry): 132621782
Entry
132621782         CDS       T09483                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 2
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    132621782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lbb04131]
    132621782
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lbb04147]
    132621782
Membrane trafficking [BR:lbb04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    132621782
Exosome [BR:lbb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   132621782
  Exosomal proteins of other body fluids (saliva and urine)
   132621782
  Exosomal proteins of colorectal cancer cells
   132621782
  Exosomal proteins of bladder cancer cells
   132621782
SSDB
Motif
Pfam: VPS28 GDH_C DUF7784 Chorion_S16
Other DBs
NCBI-GeneID: 132621782
NCBI-ProteinID: XP_060192166
LinkDB
Position
12:complement(88913784..88916674)
AA seq 209 aa
MEVKLWNDKREREMYENFAELFAIIKATEKLEKAYVRDIISATEYETECQKLIAHFKTLS
STLKDTVPSIERFHDTYKMDCPAALNRLVTSGVPATVEHRAAAATSAASSASVVAECVQN
FITAMDSLKLNMFAVDQVHPLLSDLSSSLNKLLILPADFEGKTKVREWLSRLSKMGAADE
LTEQQARQLHFDLESSYNSFVAALPTAGT
NT seq 630 nt   +upstreamnt  +downstreamnt
atggaggttaagctatggaatgataagcgggaaagggaaatgtatgagaactttgcggag
ctctttgctataataaaggcaaccgaaaagctcgagaaggcttatgttcgcgacatcatt
tcagctactgaatatgaaactgaatgccagaagttgattgctcatttcaagaccttatct
tccactttgaaagataccgtacctagcattgagcgattccatgatacctacaaaatggat
tgccctgctgccctaaaccggctcgtgacctctggggtgcctgccactgtggagcaccgt
gctgccgctgccacatcagctgcatcatcagcttctgttgtggctgagtgtgtgcagaac
ttcatcactgccatggactctttgaagctgaacatgttcgctgttgaccaggtccatccc
ctgttgtcagacctatcatcttcccttaataaacttttaattctgccagctgattttgag
gggaagacaaaggtgagagagtggctctcaaggctatcaaaaatgggagctgcagatgag
ttgacagagcagcaggcccgtcaactacactttgatcttgaatcatcatacaattctttc
gtggctgcactgcccactgctggaacgtaa

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