Lycium barbarum (goji berry): 132621805
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Entry
132621805 CDS
T09483
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132621805
04121 Ubiquitin system [BR:
lbb04121
]
132621805
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132621805
Membrane trafficking [BR:
lbb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
132621805
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132621805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
Anti-TRAP
zf-C3HC4_3
zf-ANAPC11
zf-Nse
HypA
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
132621805
NCBI-ProteinID:
XP_060192220
LinkDB
All DBs
Position
2:complement(123005018..123006684)
Genome browser
AA seq
333 aa
AA seq
DB search
MSSGENLDNGNRNFQRYWCYQCHRTVRISPENPSEIVCPRCFGHFLNEIEVANARQILDF
TAFDPSPEARILEALTLMIDPNLFNRSQGNADPIFPRSDGTETIVPPDSLRRTRERNTIR
DFWLRPRRRYSFLNNDEDEWTPESGILARPRPVIIIRPSGDNFPGGPNRLPPGVNDRDYY
TGPGLEDLIEELTENDRPGPAPAPEPTINSIPTVVIAPAHLKDDSECPVCKENFKVGGEA
RELPCKHIYHSDCIVPWLRLHNSCPVCRNPLPVSSEAELDSSDDCLEVQEERINTQRRCI
RLRHMAASLWPFRSRYRPVRNNDEPSPPSCNIL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaggagaaaaccttgataatgggaacaggaacttccaacgttactggtgttat
caatgccatcgcactgtcaggatatcaccagaaaacccgtcggagatcgtctgtcctcga
tgtttcggccacttccttaacgaaatcgaggtggcaaacgctagacaaatcttggacttc
actgcatttgatccttccccagaagctagaattcttgaagccctaactctcatgattgat
cctaatttgttcaacagatctcaaggcaatgcagaccccattttcccacgttcggacgga
actgaaactatagtaccgcccgattctctcaggcgtacacgtgaacgtaatacaatccga
gacttttggttaagaccgagaaggagatactcatttctaaataatgacgaggatgagtgg
accccggagagcggcattctagcgcgtccacgtccggtgattatcatccgaccatcagga
gataatttcccgggtggacctaaccgcctgccacccggggtgaatgatagagattattac
acaggtccaggccttgaagacctgatagaagagttaactgaaaatgatcggcccggtcca
gcaccggcacccgagccgaccattaattctattccgacggtggtgattgctccggcacat
ttaaaggatgattcagaatgtccagtttgtaaggaaaattttaaagtaggtggagaagca
agagagttgccatgcaaacatatatatcattctgattgcattgtgccttggttaagactt
cacaattcttgcccggtttgccggaatccgttgccggtttcttctgaagctgagttggat
agttcggatgattgtcttgaagtacaagaagaaaggataaatacacagaggcgttgcatc
agacttagacacatggcagcttctctttggccatttcgttcgaggtatcgccctgtgcgc
aacaatgatgaaccatccccgccatcatgtaatattctttag
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