Lycium barbarum (goji berry): 132621839
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Entry
132621839 CDS
T09483
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132621839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132621839
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132621839
Enzymes [BR:
lbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
132621839
Messenger RNA biogenesis [BR:
lbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
132621839
Transfer RNA biogenesis [BR:
lbb03016
]
Prokaryotic type
tRNA degradation factors
132621839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
S1_RRP5
KH_1
Motif
Other DBs
NCBI-GeneID:
132621839
NCBI-ProteinID:
XP_060192274
LinkDB
All DBs
Position
12:104408978..104420587
Genome browser
AA seq
966 aa
AA seq
DB search
MASVRNKVNPLLCNIPYVLTWPRFGFRTICSGRLGFASSTSPSLADTDTPVAGKKFLETF
TEEFEIGSRKISLETGKIARFANGSVILAMEETKVLSTVASSKGDAVRDFLPLTVDYQEK
QFAQGVIPTTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMASVLSSDGKQDP
DIMAANASSAALMLSDIPWGGPIGVIRIGRISGQFVVNPSMDELSISDLNLVYACTRDKT
LMIDVQAREISEKDLEAALRLAHPEAVKYLDPQIRLAAKAGKQKKEYKLSMVSEKTFEKI
QNLAKEPIEAVFTDPTYGKFERGEALEKITQDVKRVLEEEGDDEGLKILPKTVDTVRKQV
VRRRIISEGVRVDGRRLDEVRPLYCEAGNLPVLHGSAVFSRGDTQVLCTVTLGAPGDAQR
LDSLVGPSSKRFMLHYSFPPFCTNEVGKRTGLNRREVGHGTLAEKALLAVLPPEDDFPYA
VRINSEVMASDGSTSMATVCGGSMALMDAGIPLREHVAGLSVGLITEVDRSTGEIKDYRI
LTDILGLEDHLGDMDFKIAGTRNGITAIQLDIKPAGIPLDIICESLHPALKGRLQILEHM
EHEISAPRIQDDRYSPRLVTLKYSNEALRRLIGPVGALRRKIEDESGARISVGDGTLTIV
AKNQSVMEKVLEKVDFIIGREIEIGGVYKGSVVSVKEYGAFVEFNGGQQGLLHISELSHE
PVSRVSDVVSVGQQLSLMCIGQDVRGNIKLSLKATQPSPKSKTGISIDEPVLPTKQEVNV
WTAIEDVSNEQEKQGSTAGPETNDSRLKSATPAVLIRSAAECDEEEKSGSLNSKGDNGSQ
SASKYDKTRISSSLSESGFSSRNVKMSKRGNDAILDLISDDESDKDDATSGTPMSANKLK
LGMKVTAKVHQIRALGLVLDLGGGLRGMYRFESGAKRDFEVGDELRVKCSSFSTKGIPVL
SLVKEE
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgtaagaaacaaagtaaatccacttctctgtaacataccttacgttctcaca
tggccaagatttggtttccgtacaatctgtagtggtcgtcttggatttgcttcgtccacg
tcaccatcactcgctgatacagatacacctgtagctggaaagaagtttctagaaacattt
actgaggaatttgaaattggatcacgcaaaattagtttagaaactggaaagattgcgagg
tttgctaatggctctgtaattttagcaatggaagagactaaggttttgtctactgttgct
tcatctaaaggcgatgcagttcgtgattttttgccacttacagttgattaccaagagaaa
caatttgctcaaggtgttattccgacaacatacatgaggagagagggtgctccaaaagaa
cgtgaacttttatgtggtcgtcttattgatcgacccataagaccactttttccatctgga
ttttaccacgaggtgcagataatggcaagtgtgctttcttctgacgggaaacaagatcca
gatataatggcagcaaatgcatcatccgctgctctaatgttgtcagatattccttggggc
gggccaattggagtaatacgtattggaagaatttctggtcaatttgttgtaaatccaagc
atggatgagcttagcatcagtgatcttaacttggtatatgcatgtacgagggataaaact
ttgatgatagacgtccaagctcgtgaaatttctgaaaaggatttggaagctgctttgaga
cttgctcatccagaggctgttaagtatcttgaccctcaaattagactcgcagctaaagct
ggtaagcagaagaaagagtataagctgtctatggtatccgaaaaaacatttgagaaaatt
cagaatttggccaaagaacctatagaagctgtttttacagaccctacttatggaaagttt
gagcgtggagaagctttagaaaaaatcacacaggacgttaaaagagtccttgaggaagaa
ggtgatgatgaaggcctaaaaattctaccaaagacagttgatacagtgaggaagcaggtt
gttcgcagaaggatcatttcggaaggggttagagtggatggaaggcgtcttgacgaagtt
cggcctttgtactgtgaagctggtaatttacctgtattgcatggatctgcagtcttttca
agaggggatactcaggtcctttgcactgttacccttggagcccctggggatgctcaacgt
ctggattcgctggtcggtccttcaagcaagcgtttcatgctgcattatagttttccaccg
ttttgtacgaatgaagttggcaagcgaactggtctgaataggcgtgaagttggtcatggc
actcttgctgaaaaggctctgcttgctgtattacctcctgaagatgattttccatacgca
gtccggataaattctgaagtcatggcatctgatggctcgacatcaatggcaaccgtctgt
ggaggcagcatggctttgatggatgctggcattccactaagagaacatgtagcaggtttg
tcggtggggcttattactgaagttgaccgatcaactggtgaaatcaaggattatcgtata
ttaactgatattctgggtctggaggatcatctgggtgacatggattttaaaattgctggt
acccgtaatggaataactgcaatacaattagatataaaacctgctggaattcctttggat
atcatatgtgagtctctacatcctgcacttaaggggaggcttcaaatccttgagcatatg
gagcatgagataagtgctccacgcattcaggatgacagatattctcctcggctagttacg
ttaaaatacagcaacgaagcgcttcgtcgcctcattggtcctgttggcgctttgaggagg
aaaattgaagatgaatcaggtgcacggatctcggttggtgatggaacacttactatagtt
gcaaaaaatcagtcagtgatggagaaagtactggagaaggttgattttataattgggcgt
gaaattgagattggaggtgtatataaaggtagtgttgtatctgttaaagaatacggtgcc
tttgtggagtttaatggtggacaacagggcctcttacatatttcagaattgtcacacgaa
ccggtgtcccgagtttcagatgtggtatctgtgggacagcagctttctttaatgtgtata
ggacaggacgttcgtggtaatattaagttatcactaaaagccacccagcctagccctaaa
tccaagacgggcatttctattgatgaacccgttctccctactaagcaagaggtcaatgtt
tggactgccattgaggatgtatccaatgagcaagaaaaacaaggttctactgcgggaccc
gaaacaaatgattcaagattgaagtccgctacaccagcagttctaatccgaagtgcagcc
gagtgcgatgaggaggaaaaaagtggtagtctgaattcaaaaggtgataatggatctcaa
agtgcttctaaatatgataagacaaggatatcgtcctcactttcggaatctggtttttct
tctagaaatgttaagatgtccaaaagaggcaacgatgccattcttgacttaataagtgat
gatgaaagtgataaggatgatgctacgtctgggacccctatgagcgctaataaactaaag
cttggtatgaaagtaacagcaaaagtgcatcaaattcgcgcccttggcttggtgcttgat
ttgggtggtggacttcggggaatgtatcgttttgagtctggtgcaaagagggactttgag
gtgggtgatgagctgcgagtgaagtgttcaagtttttcaaccaaagggattccagtgtta
tctttggtgaaagaggagtaa
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