KEGG   Lycium barbarum (goji berry): 132621918
Entry
132621918         CDS       T09483                                 
Name
(RefSeq) lysine-specific demethylase JMJ28
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lbb03036]
    132621918
Enzymes [BR:lbb01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     132621918
Chromosome and associated proteins [BR:lbb03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    132621918
SSDB
Motif
Pfam: WRC JmjC Zn_Ribbon_1 DUF7084 Flavodoxin_5
Other DBs
NCBI-GeneID: 132621918
NCBI-ProteinID: XP_060192377
LinkDB
Position
12:complement(86715391..86724412)
AA seq 1004 aa
MEENDVLPDDQRCNRTDGRQWRCKRRVVEGKKLCEIHYVQGRHRSLKQKVPESLKIVRNT
KNKKKPKIQNSKGCLEIGFSKSERALRKFKKTKPLKRKPCVSEALDEALRRMELKRGDLP
LELIRVFLKRQVEKKNEKELKNDSAELMREFPNAVMAIPSIPAENFNNAGSVLDIKLGLD
SSSSPFSLRRYRSKNIEPLPISTMQAVPFARNGKNLRKVKRRLCHWCRKSTYRVLIKCSS
CKKQYFCLDCIKERYLEQQEIRGECPVCRRACSCRICKRNELKPSSHKEFYRHKREVQKV
QLLYYLVHLLRPILEKINEEQRIEVEMEAKILGKGESDIQVQQASAGDGKLYHCSNCNTS
ILDYHRICSKCSYSLCLYCCRESRHGSLTEDCKFEGSNEEQACSSNFERQSRMNHTSTSR
QSFSGIHYPSSKSFSNCQACADGSISCPPAEYGGCSDSFLDLRCVFPYTWIKELEISAEA
ILCSYNSQDTEHDFSSCSLCRGSDHKDSVVNSFIEVDKRQDSRDKFLYCPSIKNLREENL
EHFQKHWGEGHPIIVRNVLRISSDLAWDPVVMFCTYLEKRSKCSRDKEEAKAQNHSDWCE
VEIARKQIFMGSLEWQTHATMQREMVKFRAWLSSHLFKEQFPAHHAEVLRALPLQEYMNP
KSGLLNLAAKLPPEMPEADLGPSIYISYGGPEELLQAEFITNLGCESYDVVNILASATDV
PASKEQVRKIKCLMKNKKPQDHKESTSYSSDQKGKSSLHSGDTEESGLQDATGGQLPDGI
AEVPLDSGDSLRGQRYEDQDGNISSDNENDSGFESDVSLFCSGSVERYDDSDSDYLFEEV
DGAKKEAKTSGAQWDVFRRQDIPKLLEYLKRHSSEFTSTRGYSRQVVHPILDRSFFFDSF
HKLKLKEEFDVQPWTFEQHLGEAIIIPAGCPYQVKQLKSCINIVLDFISPENVAECIHIT
DEIRLLPEHHKARGKVLEVKKMALCGIKNAIAEIRDLTHTKQSS
NT seq 3015 nt   +upstreamnt  +downstreamnt
atggaagaaaacgatgttctacctgacgatcaacggtgtaacagaactgacggccgtcaa
tggcggtgtaaacggcgtgtagttgaaggtaaaaaactctgtgaaattcactatgtgcaa
ggtcgtcacaggtcgttaaaacagaaagtacctgaatcgctgaaaatcgttagaaatacg
aaaaacaaaaagaaacccaagattcagaattcaaaagggtgtctagaaattgggttttca
aagagtgaaagggcgttgagaaaattcaagaaaacgaaaccccttaagcgtaaaccttgt
gtttctgaggcattagatgaagctttgaggagaatggagctgaaaagaggtgatttgccg
ttagaattgattcgggttttcttgaaacgacaagtagagaagaaaaatgagaaggaattg
aagaatgatagtgctgaattgatgagggaattccctaatgctgtaatggctattccttct
atacctgcagagaattttaacaatgcaggttctgttttagatataaaattaggattggat
tctagctctagccccttttcgttaaggcgttaccgatcaaaaaatattgaaccccttcca
attagtacaatgcaggctgtgccatttgctaggaatgggaagaatttacgtaaagtaaag
agaaggttgtgtcactggtgtaggaaaagtacctaccgggttctgatcaagtgttcgagt
tgtaaaaaacagtacttttgtcttgattgtattaaagaaaggtatttggaacagcaagaa
attaggggggaatgtcctgtttgccgtagagcctgtagctgtaggatctgcaagaggaat
gaattgaaacccagcagtcataaggaattctataggcataaaagggaggttcaaaaagtc
cagctactttattatctggtccaccttcttcgtccgatactggaaaaaatcaacgaagag
cagagaattgaagtagaaatggaagcaaagatattaggaaagggggaatctgacattcag
gttcagcaggcttcagcaggagacggaaaattatatcactgtagtaactgcaacacctcc
attctggattaccacagaatctgctctaagtgttcgtatagcctttgcttatattgctgt
cgggagtcccgtcatggaagcttaactgaagattgtaagtttgaaggttccaatgaagaa
caagcttgttcttctaattttgagagacaatcaaggatgaatcatactagcacctcaagg
caaagtttctcggggatacattacccatcttccaagtcattctccaactgtcaagcttgt
gctgatggcagtatatcttgcccccctgcagaatatggtggttgtagtgatagcttcctg
gatttaagatgtgtatttccctacacttggatcaaggagctggaaatcagtgctgaagca
atattatgcagctacaacagtcaggacacggaacatgatttttcatcttgctcactatgc
aggggaagtgatcataaagattctgttgttaattcattcatcgaagtggataagagacaa
gattcgagggacaagtttctctattgtccatctataaagaatctccgtgaggaaaacctt
gaacactttcagaaacactggggtgaaggtcatcctattatagtacgaaatgtgcttcgg
atttcttctgatttggcttgggatcctgttgttatgttctgcacttaccttgagaaaagg
tcaaaatgttcccgggataaagaagaagctaaggcacaaaatcactcggactggtgtgag
gttgaaatagctagaaagcagatatttatggggtcccttgaatggcaaacacatgcaaca
atgcagcgtgaaatggtaaaattcagagcatggctttcttcccatctattcaaagaacag
tttcctgctcaccatgctgaggtcttgcgggctttaccacttcaagagtatatgaatcca
aaatctggtcttctaaatctagcagctaaattgccaccagaaatgccagaggctgattta
ggaccgtcaatctatatttcctatggtgggcctgaagaactattgcaagcagaatttatc
actaacctaggttgtgaatcatatgatgtggttaatattcttgcaagtgctactgatgtt
cctgcttccaaggaacaagtaagaaaaataaaatgtttaatgaaaaataagaagcctcaa
gatcacaaggaatctaccagctattccagtgatcagaaaggaaaatcctctctgcatagt
ggagacacagaagaatccggtctgcaggatgcaactggagggcagttgcctgatggtatt
gctgaagtacctcttgactctggtgactcactaagaggtcaaaggtatgaagaccaagat
ggcaatatctccagtgacaatgaaaatgactcaggatttgagtctgatgtctcactgttc
tgctctgggtctgttgaaagatatgacgattcagacagtgattatctttttgaagaagtt
gatggtgcaaagaaagaagcaaaaacctctggtgctcaatgggacgttttccgcagacaa
gacatcccaaaacttctagagtacctcaaaaggcattctagcgagttcacctccacgcgt
ggttattccagacaagttgttcacccaattcttgatcgaagtttcttctttgattcattc
cacaaattgaagcttaaggaggaatttgatgttcaaccctggacttttgagcaacatctt
ggagaagctattatcatccctgccggatgtccatatcaagtcaaacaacttaagtcatgc
atcaatattgttttggacttcatctcgcctgaaaatgttgctgaatgtatccacataact
gatgaaattcgtctacttcctgagcaccacaaagccaggggaaaagtgctggaggtgaag
aaaatggctctttgtggaatcaaaaatgcaattgcagaaattcgcgacctcacacatacc
aagcaatcctcttga

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