KEGG   Lycium barbarum (goji berry): 132621976
Entry
132621976         CDS       T09483                                 
Name
(RefSeq) protein RST1 isoform X1
  KO
K27498  focadhesin
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbb03019]
    132621976
Messenger RNA biogenesis [BR:lbb03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     132621976
SSDB
Motif
Pfam: DUF3730
Other DBs
NCBI-GeneID: 132621976
NCBI-ProteinID: XP_060192464
LinkDB
Position
12:complement(104593333..104609756)
AA seq 1872 aa
MDSYSQLLEKIRIPQPSLQKFAVISIFEKLRSAPPHLNPNSIPGTDAITQCLHSTSASVL
DQSVRELCRLVRDSKLDLSRGLMELQSALEASDSKFVSLFVKGIGFLVRLGFQKNSLRFI
ASENHPFVKVLSCRVEIQTELVQQVLIFIMQSKYLGMVEVCEFLIPFLNYSIVRMPSSVS
ISSFIRSLMSSLAGLCCSIPGEAIPVMKLLIGRLKFFPCDNAEDFTNISHCLECIVDAYV
VVLQQLVEMGSQLLHEVQLCGVELLDAMFSLCTNPKHMSSIENILEVSRRILIVQKDLGL
SYIPELSTVMLSLFMVLPQSELEHEQFLEVKLILFLLKWKNENEHDVLRDAYDLNEELLF
IFPAISLLSSPSKSVKQAATDLLHILGKLSNKLLIAQNTGKRKGMKFPSISTPKYIVFRL
LQHIWLQDLSPLSGSFYLNYAPAHVTPIRDKHYVSKTWSSLVTDHLRRIIARRKSSSISQ
SQKVFLTDMPMILSAIACVLVMHQTDGSSSVDILANSSNADPKLGVPLLLVIQFYNHIFS
TNTGVDFHGVLLKLLELLPSLASHPAIIPLIIQTLLPMLQNDKKPVLFATAIRLLCKTWE
FNDRVFGTLQGVLQADRFTRFASQRDICISMAVSICDICRRNPDRGVDLILSIAACIENQ
DPLMQSLGLQSLGHLCEADAIDFYSAWDVIGKHVLNYSANAMVADSLCLLLKWGVMDAQA
YPEASVDVLKILWDIGTSQDFRPASLWSKARASAFVALANYEVEHLERSIPDFKDRNYEY
LVSETDPEVLTALEGFEVKLLTFEHITRRRLVKQKRVSANKIEKLLDVFPHLIFASGKER
REKELPGAALFCLSFTKKDSRKPGAAEDLQDVQAKYEASLVDIATSLQLSRNTLIAILSL
QSWKPFMRRWMRAHILLLDAKLQTAVLDKTPKAAIEILKSMTAIAERSLPRAAENIALAV
GALCSVLPASAHAVKATASKFLLDWLFQHEHEYRQWSAAISLGVVSSCLHLTDHKQKFEN
INALLEVASVSKSTLVKGACGVGLGFSCQALLARADADDNAHPGKETYKIEEADLLRKII
RTLSELISQFTPSSADVLETLSVSFPLGSDHLNSDIAGEFLGSTSENLEEDVWGVAGLVL
GLGNCVGAMYRAGMCNAILNVKALLISWIPHPTEVTTMSKDHEILLSVGSCLAAPIVMAT
CQRFELTDDADLEHLLSSYKELISDLLSIKRFDTFHQSLLMASCLGAGSLVGVVLNEGLH
SLKIEHIKELLLLFRKSYSDSNPPLIHLGAMLGVVNALGAGAGTLIEPHPLSSSHASSDR
KEASYISGPLITNAVLEPDLTSLVQEMFLVAQNSDANQLQQHAAWAISFLRQYLWVKELQ
NYGSTAENDSVGAKTVSQSFPEDSTVMKLSLWLMHLNYLGTGDVSHVNTVSSILRCLSRA
SRLPPLDWGAIIRRCMRYEGQVAGLLVQDITFERGNLREECLLFSLSHANQFDTLLSFLD
ELCDIPRLRMLEPRLQFFVLSHLADLVKIFSGSRVVKLFEDVAELLSWSACSESCNSLEK
ISFRISCWRGLKLCLDESSHHSQDFKSSMEKCMEFLFTLLPCAHTEGPCQGKIFEEWSEA
IRCLEKAQQGWLLDLLKVSEVNFTVANSLPFETVKKIQAIAKLVQSGSLPLTVLGKLKAC
LLDCRSQDIWDALTEVSITVQHAEGNAKRQWLIEALEISCVTRFPSTALQFVGLLCGSCC
IYRPLLIVDKFTVLSDLPVTLTSLLSDSTWMTVADSVVSYLWASTERIYEWNKQLKGDCD
QLPNTQPIDTSENDIARFILLVMYQACVSLKHHLPPEKQLQLANMVVPTNMDVHELHARL
NCDVKSISAFSP
NT seq 5619 nt   +upstreamnt  +downstreamnt
atggactcttattctcaactgttggagaaaattcgaatccctcaaccatccctacaaaaa
tttgcagtaatctcgatcttcgagaagcttcgatcggctccacctcacttgaaccctaac
tccatacctggaacagacgccattactcagtgccttcattccacgtcagcttctgtactt
gatcaatcggttagagagctatgccgccttgtaagagactccaaattggacctttctcgc
gggttaatggagctccagtctgctctcgaagcctccgattcgaaatttgtcagtttattt
gtcaaaggcataggttttcttgttcggttaggtttccagaagaattcgttgcggtttata
gcttcagagaatcatccatttgtcaaggtgctttcttgtcgagtggagattcaaacagag
ctagtgcaacaagtgcttatttttataatgcagagcaagtatttgggaatggtggaagtt
tgtgaattcttgatacctttcttgaattattcaattgttaggatgccctcatctgtttca
atttcttcatttataagaagtttgatgtcgtcattagctggactttgttgttcgattcct
ggggaggccattcctgttatgaagcttctcattgggcgtttgaagttctttccatgcgac
aatgcagaagattttactaatatttcgcactgccttgaatgcattgtagatgcgtatgtg
gtggtcctgcaacaattggtggaaatgggatcgcagctgcttcatgaagttcagttgtgt
ggtgtggagctactggatgctatgttctccttatgtacaaatccaaagcacatgagttca
attgagaacattttagaagtatcaaggcgcatattgattgtgcaaaaagatcttggtttg
agctatatccctgaattatcaacagttatgctgtccttatttatggtacttccgcagtct
gaacttgaacacgaacagttcttggaggtgaaacttattctatttctgttgaagtggaaa
aatgagaatgagcatgatgtccttagagatgcatatgatttgaatgaagagctcttgttc
atcttccctgctatcagccttctttcttctccgtctaaatcagtaaaacaagcagcaacc
gatttgcttcatattttgggaaagctttcgaataagctacttattgcacaaaatacagga
aagcgaaaaggaatgaaatttccttccattagtacgcctaagtacatagtcttcagactc
ttgcagcatatatggcttcaggacctatctccattatctggttctttttatctgaattat
gcgcctgctcatgtcactcctattagagacaagcactatgtatcaaaaacttggagctcc
ttggttaccgatcacctgcgtcgtattattgcaagaagaaagtcgtcatccatctcacag
tctcagaaggtctttctgaccgatatgcccatgatactcagtgcgattgcctgtgtcctt
gtcatgcatcaaacagatgggagctcttctgttgatatcttggctaatagcagcaatgca
gatcctaaacttggtgtccctttgttgctagtcattcaattctacaatcatatattttcc
acaaatacaggtgttgattttcatggagttctgctaaaacttttggaactgctgccatca
cttgcttcccatcctgcaatcatacctctcattattcagacattgttgcctatgcttcag
aatgataagaaacccgttctatttgccactgcaattcgtttactttgcaagacctgggaa
ttcaacgaccgtgtctttgggaccttgcagggagtactacaagcagatagatttactcgg
tttgcgtctcagcgagatatttgcattagtatggctgtttccatctgtgatatctgcaga
agaaatcctgatcgtggagtggaccttattttatctattgcggcttgcattgagaatcaa
gatcctttaatgcagtctctgggtcttcaaagccttggtcacctctgtgaagcagatgct
attgatttttattctgcttgggatgtgattgggaagcatgtgctaaactattcagcgaat
gccatggtcgctgacagcctctgtcttcttttgaaatggggtgtgatggatgctcaagca
taccctgaagcatcagtagatgtgttgaagatactgtgggatattggaacctcccaagac
tttaggccagcttccttatggtccaaagctcgggcatctgcctttgtggcattagccaat
tatgaggtagagcatcttgaaagaagtattccagatttcaaggacagaaactatgagtat
cttgtgtccgaaactgaccctgaagtgcttactgcgctggaaggatttgaagtcaaactt
ttaacttttgaacacatcacccgtcgaagattagtaaagcagaaaagggtgtctgcaaac
aaaattgagaagctgttagatgtttttcctcatctcatctttgcttcaggaaaagaaaga
agagaaaaagaattacctggtgcagctcttttttgcctttccttcacaaagaaagattca
aggaagccaggagcagcggaggacttgcaagatgtacaagctaaatatgaagcctcactg
gttgatatagcaacatctcttcaactgtcaagaaatacattgatagcaattctttctttg
caatcatggaagcccttcatgcggaggtggatgagagcccatatcttgttacttgatgct
aagttgcagactgctgttttggacaaaacgcctaaagctgctattgaaattctgaagagt
atgacagcaattgcagagagatctctccctcgagctgctgagaatatcgcattagctgtt
ggagccctttgttcggtgttgcccgcttctgcacatgctgttaaagcgaccgcgtcaaag
tttttgctggattggttgttccaacatgaacatgagtatcgccagtggtcagcagcaatc
tctcttggtgtggtgtcaagttgcctacaccttactgatcacaagcagaaatttgagaat
atcaatgcactgcttgaggttgcatctgtgagcaaaagcacacttgtgaaaggagcttgt
ggagttgggttaggtttttcatgtcaagctcttctagctagagccgatgctgatgataat
gctcacccgggcaaagagacatacaagatagaggaagcagatttgttgagaaagatcatc
aggaccttatccgagttgatctctcaattcacaccttcttcagcagatgttcttgaaact
ctatcggtatcttttccacttggatcagatcatttgaattcagatattgctggtgaattt
cttggttcgaccagtgagaatttagaggaagatgtgtggggcgttgcggggcttgtattg
ggtttgggtaattgtgttggtgcaatgtacagagctgggatgtgtaatgcaattctcaat
gtgaaagcgttacttatttcgtggattccacaccctactgaagttacaactatgagcaaa
gatcatgaaattttattatctgtgggctcgtgtcttgctgcaccaattgtaatggccacg
tgtcagaggtttgaacttactgatgatgcagatctggaacatctattgagttcctataag
gaactgatttctgacttactctctattaaaagatttgacaccttccatcagagcttattg
atggcatcttgtttgggggcaggaagccttgttggtgtggttttgaatgaagggttgcac
tctttgaaaattgaacacattaaagaattgttactattgttcagaaaaagttactctgac
tccaatcctcctcttattcatcttggtgccatgcttggagttgtaaatgcattgggagca
ggtgcagggacactgattgaaccccaccctttgagctcatcacatgcttcttctgatcgg
aaggaagcttcttatatatctggtcctttaattacaaatgctgttctcgagcctgattta
acatcactagtgcaagagatgttcctagttgcgcaaaattctgatgccaatcagttacag
cagcatgcagcatgggcaatttcatttcttagacagtatttgtgggtcaaagaactccaa
aattatggaagtacggcagagaatgattctgttggtgcgaagactgtctcacaaagtttt
cctgaggacagcacggtcatgaaattgtctttgtggctaatgcatctgaactatctcggg
acaggtgatgtttcacatgtaaacacagtttctagtattctgcggtgtctttcacgtgct
tctaggctaccaccattggattggggagcaatcatcagacggtgcatgagatatgagggt
caagttgctggcttgttggtgcaagacataactttcgagagaggaaatctcagggaggaa
tgcttacttttctcattatcacatgctaaccaatttgatactctccttagcttccttgat
gagctatgcgacatccctcggttgaggatgcttgagcctcgtctgcaattctttgtgctt
tcacatttggcagatctagttaagattttctcaggttctcgggtcgtgaaattatttgaa
gatgttgctgagttattatcatggtctgcttgttctgagagttgcaactccctagagaaa
atctcatttaggatttcatgctggaggggacttaaattgtgtttggatgaatcttctcac
catagtcaagactttaaatctagcatggaaaaatgcatggagtttctctttactttgctg
ccttgtgctcatactgaagggccatgtcagggtaaaatttttgaagaatggtctgaagca
attagatgccttgagaaggctcaacaaggatggctattggatcttctaaaggtttcagag
gtgaatttcactgtcgcaaactctctgccgtttgaaactgtgaaaaagattcaagcaata
gcaaaactagtccaaagtggttccctgccattgactgtgcttggtaagctgaaagcttgt
cttttggactgcagatctcaagatatttgggatgctctaactgaagtttcaataaccgta
caacatgctgaagggaatgccaaaagacaatggctcattgaggcactggaaattagttgt
gttacgagatttccttccacggctctgcagtttgtcggcctgctatgtggaagctgctgt
atctataggcccctgttaattgtggacaaattcactgtgttgagcgatctgccagtcacc
ctcacgtccctcctctctgatagcacctggatgacagtagcagattctgttgtttcttat
ttgtgggcatcgacagagcggatatatgagtggaacaaacaactaaaaggtgattgtgat
cagttacctaatacacagcccattgacacaagtgaaaatgatatagcccgctttattcta
ctagtgatgtatcaagcttgtgtctctttgaaacaccatcttcctccagagaaacagctt
cagcttgccaacatggtggtaccaacaaatatggatgtccatgagttgcacgcaaggtta
aattgcgatgtgaagagtatctctgctttcagtccttga

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