Lycium barbarum (goji berry): 132622018
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Entry
132622018 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132622018
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132622018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbb03009
]
132622018
Ribosome biogenesis [BR:
lbb03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
132622018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap
Nrap_D3
Nrap_D2
Nrap_D6
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-GeneID:
132622018
NCBI-ProteinID:
XP_060192508
LinkDB
All DBs
Position
12:complement(93144710..93157414)
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AA seq
1046 aa
AA seq
DB search
MALGYTDSMNLKVRALLKEVQLEHSPEITATVDKFVSAIKESIDKIPDDQVTADLAPGFV
RDINADKVEFTFKKPKSLEVRGSYSIQCVTKHDLNVDLFLHLPKECFYEKDYLNYRYHAK
RFLYLCKIKEQLTKSPLIKAVRWSSFQNEARKPILLIYPAVKLIGNAEFVVRIVPTATSL
FSAAKLRLERNNIHTLKQGDALRATPRYNNSILEDLFLEDNAEFVKKTFSGWKELGEALI
LLKVWARQRSSIYAHDCLNGFLISIILAFLATKPGRHHITSSMNTMQIFRITVDFIATSK
TWDKGLFIQPQHEKNASNKDMQLFPVVICNSFEDFNLAFRLSHNGFRELCNEAALAVNCI
NKCEDGGFDELFITKIDFPARYDYCVRLNLRGNSEVSSSGFCLDDEFWRSQEQKVLSLMD
QGFGDRSNSVRVIWRNIPSECNFEEGLSELDNEPLLIGISVNSAEAAFKMTVIGPSPEER
DKALEFRKFWGEKASLRQFRDSRIAEVAVWEHEEWQRHLIIKDIAEHVLSRHLSIPKEKI
IPTVDQLDFCLLHRDVDPISFSKSLLVALEELSKRLLQLNDIPLKVSTVQALDSAARLTS
VFPPMPHPLAHEKGVQIKPRKPVSTCINPVEVMIQLEGSGNWPMDEIAIEKTKTAFLLRI
AESLQNNWGMEFTATEDDVDVLMSGYAFRLKISHERALGLVTGQSNNSRQWSLSADRKLL
LRQQHASKINALRGRYPIYGPIVRLAKRWVSAHLFSTVLTEEAVELLVSDLFLRPLPFEP
PFSRITGFLRFLRLLSEYDWAFSPLIVDFDGDFSTEEKNKINENFMTSREEHEKDTQNLS
PAMFLATKYDITSEAWTRSSPTAADLRRLVAYSTSSANLLTKLISQDGYDCYGWKCLLRT
PLSNYDAVVLLHRDKLPYPQHLLFPSELEQERCVVRGRATKIFHPFFSPGDFKVNSGELK
NKLMVDFDPVRCFISEIERGFPDEVKVWYDAVGGDALGLTLGKASLKKRKHDDSTESKDL
LSTLKTIGEAGKGLVRSIHVVKARKT
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaggttacacggactcgatgaacttgaaggttagggcattgttgaaggaggtc
cagctcgaacactcccctgaaatcactgcaaccgtcgacaagttcgtctccgccatcaaa
gaatcaattgataagatccctgacgaccaggttacggctgacttggctccagggtttgtt
agagacatcaatgctgataaggtggaattcacgtttaagaagccaaaatctttagaagtt
cgtgggagttattctatacaatgcgttaccaagcacgatctaaatgtggatctttttctt
cacttgccaaaggagtgcttttatgaaaaagattacctaaattatcgataccatgccaaa
agattcctttatctctgcaaaatcaaggagcagctgacaaaatctccattaatcaaagct
gtgaggtggtctagtttccaaaatgaggctcggaaacctatattacttatctatccagct
gttaagcttattggaaatgctgaatttgttgtgaggatagttcctactgcaacatctttg
ttcagtgcagcaaaacttcggctggagcgaaacaatatccatactctcaaacaaggagat
gctttacgagcaacacccaggtacaataatagtatattggaggacttgtttcttgaggat
aatgcagaatttgtcaaaaaaactttctctggatggaaagaattgggggaagccttgata
ctgctaaaagtgtgggctcggcaaaggagttcaatctatgcccatgattgcttgaatggg
tttctaatctctataatattggccttccttgcaacaaaacctggtaggcatcatataacc
agttccatgaatacaatgcagatatttcgcatcacagtggacttcattgccacctctaag
acatgggataaagggctttttattcagccccagcatgaaaaaaatgcttcaaacaaggat
atgcagttgtttcctgtggtcatttgcaattcatttgaggacttcaatttggcattccgc
ctgtcgcacaatggtttccgagagctgtgtaatgaggctgctttggcagttaattgcatc
aataaatgtgaagatggtggttttgatgagctttttatcacaaagattgactttccagct
agatatgactactgtgtgaggttaaacttgaggggaaacagtgaagtttcaagctcagga
ttctgcttagatgacgaattttggagatctcaggagcagaaggtactctccctcatggac
caagggtttggagacagatctaactctgttcgtgttatttggagaaacattccatctgaa
tgcaactttgaagagggactgtcagagctagacaatgagccgttgcttattgggatttct
gtcaactctgcagaggcagcctttaaaatgactgtcataggtcctagccctgaggaaaga
gacaaggctttagaatttcggaagttttggggagaaaaggcgtctcttcgacagtttcgt
gatagtagaatagctgaagttgcagtatgggaacatgaggagtggcaaaggcatctcatc
ataaaagatattgctgagcatgttttgtctaggcatctttccatacccaaagaaaagatc
attcctactgtggatcaacttgatttttgtctcctccacagggatgtagatcctatatca
ttctcaaaaagtttgctggtggcacttgaagagctgtcaaagcgtttgcttcagcttaat
gacattccactaaaggtgtcgactgtgcaagctctggattcagctgctaggttgacatct
gtcttcccgcccatgcctcatcctctggcacacgagaagggtgttcagataaaaccaagg
aaacctgtttcaacctgtataaatccagttgaagttatgattcagcttgaaggatctgga
aattggccaatggacgaaattgcaatagagaagacaaaaactgcgtttcttcttagaatt
gctgagagtctgcagaacaattgggggatggagtttacagctacagaagatgatgtagat
gttctaatgtctggctatgcattccgccttaaaatttctcatgaaagggctctaggtttg
gtgactgggcaaagtaataatagtcgacaatggagcctctctgctgacagaaaacttctt
ctccgacagcaacatgcgagcaagattaatgctttaaggggtcgttatcccatatatgga
ccaatagttcggctagctaaaagatgggtctccgcacacttattttccacggtgctgaca
gaggaggcagttgaactgttggtttcagatcttttcttgagacctttgccatttgaacct
cctttctcccgaataacaggatttttgaggttcttacgattattgtcggaatatgattgg
gccttttctcccttaatcgttgattttgatggcgacttttcaactgaggagaaaaataaa
attaatgagaatttcatgacaagtagagaagagcatgaaaaggacacacagaatttaagt
cctgcaatgttcttagctactaaatatgacatcacatctgaagcatggacaagatcctca
ccaactgcagcagacctaagaagactggtggcttattcaactagcagtgcaaatttgttg
accaaactgatttcgcaagatggatatgactgttatggatggaaatgtcttctccgcacg
cctctgagcaactatgacgctgttgttcttctccacagggataaattgccctatccccag
catcttctcttcccatccgaactcgaacaagagcggtgtgtggtgcgtgggcgtgcaacc
aagattttccatccattcttttctcctggagacttcaaagtgaactctggggaattgaaa
aataagctgatggtggattttgatccagtaaggtgctttatttccgagatcgagagagga
tttcccgatgaggtcaaggtgtggtacgatgctgtgggtggtgatgctcttggtcttaca
ttaggaaaagcaagtttaaagaaacggaagcatgatgactccacagagagcaaggatctt
ttgagtacgctaaaaaccataggcgaggctgggaaaggccttgttagaagtattcatgtc
gtcaaggcccgaaaaacgtaa
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