Lycium barbarum (goji berry): 132622172
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Entry
132622172 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132622172 isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132622172
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132622172
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132622172
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4_2
zf-RING_5
GAGA
Motif
Other DBs
NCBI-GeneID:
132622172
NCBI-ProteinID:
XP_060192702
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Position
12:43802270..43807826
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AA seq
214 aa
AA seq
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MMGTFKIFPFGVFVEEKGKNRNQSEKPGEDDQCPICFGDFTIPCRTNCGHWFCATCILQL
WNYKSTVQRCKCPICCRPISKLVPEDTLLVRQQEDSELLRDIGRYNHLYVGGVYGVFLKL
VALPLLMWSFFSKLIDPDHVKLNCYVMRLFALLLSWIYSRCNFEFIPTGRLGIWRLLDIC
AMSMVAVFYFAGLFRRWVLRRHVRLLPVLQAHPS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgatggggacattcaagatctttccttttggtgtatttgttgaagaaaagggtaaaaat
aggaatcaaagtgaaaagccaggtgaggatgatcagtgtccaatatgttttggagacttc
acaattccttgcaggaccaattgtggacactggttttgtgcaacttgcatattgcagcta
tggaattataaatcaacagtacaacgttgcaaatgtcccatatgctgtcgtcccatcagt
aagctggttcccgaggatactttgcttgtgcgacaacaagaggatagtgaactccttagg
gacattgggcgatacaatcacctatacgtaggtggtgtttatggtgtgtttctgaaatta
gtggcattgccactgttaatgtggtcattcttcagcaaactgatagatcctgatcatgtt
aagttaaactgctacgtaatgcgcctttttgctttactgctgagttggatctacagtcgc
tgcaactttgagtttattcctaccggacgtctgggaatatggagactacttgacatctgt
gctatgtcaatggtagccgttttctattttgcaggcctattccgtagatgggtgcttagg
cgtcatgtgaggctgttacctgttttacaagctcacccgagttaa
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