Lycium barbarum (goji berry): 132622194
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Entry
132622194 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132622194
KO
K11790
denticleless
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132622194
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132622194
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
MIOS_WD40
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_WDR75_2nd
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
132622194
NCBI-ProteinID:
XP_060192735
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Position
12:complement(67879439..67884263)
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AA seq
508 aa
AA seq
DB search
MEGCNNKHHSFFQDIKSRELHGFPVKKRPYMSIESSEVNQIGAVAVEHDGNTPPPMAISF
CKTTKNSHILAVADEGGYVSLYNTRLKFPSSSTHRQNAEKAKMSEWVAHDNAIFDVCWIK
DDTNILTASGDQCIKVWDVQEKQCIRTLMGHTGSVKSICPHPTNQDIIVSGSRDGSFSLW
DLRSSCSSSQKFYTPSIAAVHKAHISPCQRRVKGGKASSMSITSVLYLKDEISIATAGAV
DSVIKFWDTRNLKSPVLQACPHPEASSNKGKRLHGVSSLSQDLNGVFIAASCMDSRIYLY
NVLQAENGPVKSFTGCQINSFFVKSAISPDAAHVLGGSSDGNAYIWLVNKPLADPTILKS
HDGEVTAVDWCPSETGKVATASDDFTARFWNIQSSCYSNTRSPSSIRRRVMALSSMERRK
LFTDDKPARIKNDSDGCHSNIACNENFGSPTKTTEISTPESKKKKHSQGFEVEENLGKTP
EAAIKSPSSVLNPPSSLKRTIRDYFLMT
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggaaggatgtaataataagcatcactcctttttccaagacatcaaatcaagagagctt
catggattcccagttaaaaaaagaccatatatgagcattgaatcttctgaagtcaaccaa
attggtgctgtggctgttgagcacgatggcaacacaccgcctcccatggccatttccttc
tgcaagacaactaaaaattctcatattcttgctgttgctgatgagggtggatatgttagc
ttgtataatacccggttgaagtttccttcatcatcgacacaccggcaaaatgcagaaaaa
gctaagatgtcagagtgggttgctcatgataatgctatatttgatgtatgttggataaag
gatgataccaatatcttaactgcttcaggcgatcaatgtataaaggtatgggatgtacaa
gaaaagcaatgtattagaacattaatgggtcacaccgggagtgtaaaatccatttgtcct
catcctacaaatcaggatattattgtatctggttcaagagatgggtccttttccctatgg
gacctgaggagctcgtgcagcagcagtcagaaattttacacaccgtcaattgcagcagtc
cacaaggctcacatttctccttgtcagaggcgggttaaaggtggaaaggcttcttctatg
agtattacttcggtcctttacctgaaagatgagatttccattgctactgctggagcagtt
gacagtgtcataaagttctgggatactaggaatctgaagagtcctgttctccaggcatgt
cctcatcctgaagcgtcatctaataagggaaagcgattacatggagtatctagtttatct
caagatttaaatggcgtgtttattgctgcttcatgcatggacagcagaatctacctctac
aatgtgcttcaggcagaaaatgggccagtgaaaagtttcacaggatgccaaattaattca
ttttttgttaagtcagcaataagtcctgatgcagctcatgtactcggtggttccagcgat
ggaaatgcgtatatatggctggtgaacaaacctctagcagatcccactatattgaaaagc
catgatggagaagttacagcagtagactggtgcccatcagagacaggaaaagttgctact
gcatcagatgatttcacggcgcggttttggaacatccaaagcagttgttactcaaacaca
agatctccatcatccattcgaagaagagtaatggcactttctagcatggagcgtcgcaaa
ctgtttactgatgataaaccagcaaggatcaagaatgattctgatggttgtcattcaaat
atagcatgtaacgaaaacttcggtagtccaactaagactactgaaatcagcactccagag
tcaaagaagaaaaaacattcacagggttttgaagttgaagagaacttagggaaaactcca
gaagctgcaatcaagagcccttcttctgttctgaatcctccctcctctttgaagaggaca
attagagattacttcttaatgacttga
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