KEGG   Lycium barbarum (goji berry): 132622208
Entry
132622208         CDS       T09483                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    132622208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lbb03036]
    132622208
Chromosome and associated proteins [BR:lbb03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     132622208
    NSL complex
     132622208
   HMT complexes
    COMPASS/SET1 complex
     132622208
    COMPASS/SET1 complex (yeast)
     132622208
    MLL-HCF complex
     132622208
    MLL3/MLL4 complex
     132622208
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     132622208
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_WDR19_1st eIF2A WD40_like Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N RMC1_N Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 WD_LRWD1 PROPPIN Beta-prop_RIG_1st VPS8_N Big_7 Ge1_WD40 Beta-prop_VPS8 PALB2_WD40 DUF5888 Beta-prop_NOL10_N WDR54 Beta-prop_LRRK2 KNTC1_N ZP1_ZP4_Ig-like
Other DBs
NCBI-GeneID: 132622208
NCBI-ProteinID: XP_060192755
LinkDB
Position
12:95627613..95634144
AA seq 316 aa
MSSTNEPSSDSSFKPYSLKHTLSGHKRAISSVKFSDDGNLIATSSADKTARTWSVTDGSL
LHEFLGHEQGISDVAFSSDNRHLATASDDKTVRLWDVSTGSHVKTLTGHTNYVFCVNYNP
QSNMLVSGSFDETVRLWDVKTGKCLKVLPAHSDPVTAVNFNRDGSLIVSSSYDGLCRIWD
ASTGHCMKTLIDDENPPVSFVKFSPNGKFILVGSLDNTLRLWNFSTGKVLKTYSGHVNSK
YCVSSTFSITNGKYIVSGSEDNCIYMWELQSRKIVQKLEGHTDTVISVACHPTQNMIASG
SLGNDKTVKIWTQGED
NT seq 951 nt   +upstreamnt  +downstreamnt
atgtcttcaactaacgagccttcatcagattcttcattcaaaccctacagccttaaacac
acactctccggccacaaacgcgccatctcctccgtcaaattctccgatgacggcaacctc
atcgccacctcctccgccgacaaaaccgcccgaacatggtccgtcaccgacggctctctt
cttcacgaattcctaggtcacgaacagggcatatccgacgtggcattctcatccgataat
cgtcacttagctactgcttctgatgacaaaactgttcgattatgggatgtttctactggt
tcccatgttaaaaccctaacaggtcatacgaattatgttttctgtgttaattataatcct
cagagtaatatgcttgtttcgggttcgtttgatgagactgttaggttgtgggatgttaag
actggcaagtgtttaaaggtgttgcctgcacattcggatcctgttactgctgtgaatttt
aatagggatgggtccttgattgtttcgagtagttatgatggcttgtgtaggatttgggat
gcttctactggccattgtatgaagactcttattgatgatgaaaatccacctgttagtttt
gttaagttttcgcctaatgggaagtttatactcgttggctctttggataatactctgagg
ctttggaacttctcgactggtaaagttctgaaaacttactcgggccatgtcaactcgaag
tactgcgtttcatcaacattttccataacaaatgggaaatatatcgttagtggttctgag
gataattgcatatatatgtgggagcttcagtcaaggaagatagttcaaaaattggaaggt
catactgatactgtaatttcagtagcatgccaccctactcagaacatgattgcttctggt
tctcttgggaatgacaagactgtgaagatatggactcagggggaagactaa

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