Lycium barbarum (goji berry): 132622219
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Entry
132622219 CDS
T09483
Name
(RefSeq) DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lbb03029
]
132622219
Enzymes [BR:
lbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132622219
Mitochondrial biogenesis [BR:
lbb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
132622219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
DUF3047
Motif
Other DBs
NCBI-GeneID:
132622219
NCBI-ProteinID:
XP_060192763
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All DBs
Position
12:complement(100778756..100790666)
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AA seq
1021 aa
AA seq
DB search
MSSTKTPISLTIKFNQFTDLETKPYQNSSIMWRNIVKQFSSRTPQKLLLNSKNRTYSFLG
FSQDSIFKDKTKLRSFIPVSCLNSGFPEMGFQNLGEFLPGDEFLNRPLLYAMKSQDFCRK
NYASVAEAEAASSTDADEDTKDVSVVGEVQELLTEFKKEEKKQFDFMRRKQRMLTSGMGH
RKYNSLKRRQVKVETEAWELAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIA
EEQEFCSQGKSKAAYSKYFHQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDA
IEQEVRIHKFLEKTKKHKAEKDTKMEDGEHVTQEQEKLRKKVTSLMKKQKLRAVNQIVRS
QDDSKPWGQDAKAKVGSRLIELLLQTAYIQSPADQLAVDPPDIRPAFVHSVRTVSKETKS
ASRRYGIIQCDELVFKGLEKTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGA
RQQREAVKRASRNQLRPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLANLVDRDDVP
LPEEPDTEDEAVRTKWRWKVKSVKKENRERHSQRCDTELKLAVARRMKDEEGFFYPHNVD
FRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVDKLSLEGR
IAFTENHLDDIFDSADKPLEGRRWWLNAEDPLQCLAACINLSEAVRSSSPETMISHLPVH
QDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIATRVLDIMKRDAQRDPEEFPD
AVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAA
KVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTS
LQILTLQRDTEKVMAKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHA
CDVDKLNMILREKFVELYETPVLEKLLESFQISYPTLSFPPLPERGDFDLRDVLESPYFF
N
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcactaaaacccccatttccctcacaattaaattcaatcaatttactgattta
gaaacaaaaccatatcagaattcctctattatgtggagaaacatagttaaacagttctct
tcaagaaccccacaaaagcttcttcttaactccaagaatcgtacttatagctttctcggt
tttagccaagattctatttttaaagataaaacaaaattaagatcatttatccctgtttct
tgtttaaatagtggatttcctgaaatggggtttcagaatcttggtgaatttttacctggg
gatgagtttttaaacagacccttattgtatgctatgaaaagtcaagatttttgtcgaaag
aactatgctagtgtagctgaggctgaagcagcatcttccactgatgctgatgaagacaca
aaagatgtgtctgtagttggtgaagttcaagaattgttaacagaatttaagaaagaagag
aaaaaacagtttgattttatgcggcgaaagcaaaggatgttgactagtggtatgggccat
aggaagtataactcacttaagaggaggcaagttaaggtagagacagaggcatgggaacta
gcagcaaaagagtacagggagcttttgtttgatatgtgtgagcagaaattagcacctaat
ttgccatatgttaagtcattgtttttaggatggtttgagcctttgcgtgataagatagct
gaagagcaggaattttgtagtcaagggaagagtaaagcagcttattctaagtattttcac
cagttacctgcagatatgatggcggttatcactatgcataagttgatgggattattgatg
acaggcggcgaccatggtactgcaagagtggtccaagctgcgcttgttattggtgatgca
attgaacaggaggttagaatacacaagttcttagagaaaacaaagaagcataaagccgag
aaagatacaaaaatggaagatggagagcatgtcactcaagaacaagagaaactacgcaag
aaagtcactagtctaatgaaaaaacagaagttacgtgcagtgaaccagatagtgagaagt
caagacgattcaaagccctggggccaagatgctaaagcaaaggttggaagccgtttaatt
gagttgcttctacagacagcttatatacagtctcctgctgatcagttagcagttgatcca
cctgacattcgacctgcctttgtacacagtgttagaactgtatccaaagaaacaaagagt
gcgagcagaagatatggtattatccaatgtgatgaactggtttttaaaggacttgaaaaa
actgccagacacatggtgataccttacatgccaatgttggtgcctccagtgaagtggact
ggttatgacaagggtggacacctctatctgccttcgtatgtgatgcggacacacggagca
agacaacaacgtgaagcagtaaagagagcctcccggaaccagttgcgaccagtttttgag
gctcttgatactctgggaagtaccaaatggaggataaacaaaagggtactttctgttgtt
gatagaatatgggctggtggcggtcgtctggctaatttggttgaccgtgatgatgtccct
ttgccagaagaaccagatacggaagatgaggcagtacgcacaaagtggaggtggaaagta
aaatctgtcaagaaagagaacagagaaaggcactcacaacgatgtgacaccgagctcaaa
cttgctgtagcacgtagaatgaaagatgaagaaggtttcttctatccgcacaacgttgat
ttccgaggtcgtgcataccccatgcatccacatttaaaccatcttggttctgatatctgt
cggggtgtcctggagttcgcagaaggtcgtcctcttggagagtcgggcttgcgctggttg
aagatacatcttgcaaatttatttgctggtggtgtggataaattatctcttgagggcaga
atagcttttactgaaaatcacttggatgatatatttgattctgctgacaaaccgctcgaa
ggaagacgctggtggttgaatgcagaggatcctcttcagtgcctggctgcatgcattaat
cttagtgaagctgtcagaagctcatccccagagacgatgatttctcatcttcctgtgcac
caggatggttcctgcaatggtttacaacattatgctgcccttggaagagatgagttggga
gctgctgcagtcaatttggttgctggagaaaaacctgctgatgtttactctggcatagca
actagggtccttgatattatgaaaagagatgcacagagagatcctgaagaatttccagat
gctgtgcgtgcaagggttttagttaatcaggttgacaggaagttggtgaagcagacggtg
atgacatcagtctatggcgtcacttacattggtgctcgtgatcaaataaagaggaggtta
aaggagcgtggagcaattgctgatgattctgagctatttggtgctgcttgctatgctgca
aaagtcacattaactgcattaggagagatgtttgaagctgcgcggagcatcatgacttgg
cttggagagtgtgctaagataattgcttctgaaaatgaaccagtcagatggacaactcct
cttggacttcctgttgttcaaccttaccgcaaaattggaagacatcttattaagacttct
ttacaaattttgactttgcaacgcgacacagaaaaggtaatggccaagaggcaaaggaca
gcttttccaccaaatttcattcactcccttgatggttcacatatgatgatgactgctgtt
gcatgcagaagggcaggattaaattttgcaggtgttcatgactcgtattggacgcatgca
tgcgatgttgataagttgaacatgatattgagagagaagtttgtagagctttatgaaacg
ccagttcttgagaaattgttggagagcttccaaatttcctatcctacattgtcattcccg
cctttgcctgaacgtggagactttgatttgagagatgtcctagaatctccctatttcttc
aattga
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