Lycium barbarum (goji berry): 132622332
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Entry
132622332 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132622332
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132622332
Enzymes [BR:
lbb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
132622332
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
132622332
Prokaryotic type
132622332
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PatG_C
Motif
Other DBs
NCBI-GeneID:
132622332
NCBI-ProteinID:
XP_060192905
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All DBs
Position
12:104908325..104913593
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AA seq
523 aa
AA seq
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MAQSAVIPRMSLMFLHSKSMSSFSKPRAIIFFPSKLKSHFFSTTSTPYPLQYEMIISRPS
TIQQQRFLPNSKPTDSQPEPEPGSELGFDDWVERKLNSKSSSEEPNSGIVKMDKGKRKYY
NKRRKRMFGGSDSDDEENNRDKDNEFVELKQEVVELRTLHKKEEELYFYDNFAYPWEKDK
HYKMVYQLEKKYFPDQCFDKAFLEPGESNENVKKSRKKVGKRESIIARAIDDGVDKNLIF
FEEEEKGVSETKEQVKVDVAEKKVEEFFKCLKKVPNKESGVVSAEPFLATRSTGLPPKWD
SPGGTVVLVNKPKGWTSFTVCGKLRRLTKVKKVGHAGTLDPMATGLLIVCVGKATKIVDS
YQGMMKGYSGIFRLGEATSTWDADSPVMQREPWEHIKDEDIKKTAASFYGEIWQVPPMFS
AIKVGGEKMYDKARRGESIELSPRRISIFEFDVKRSLDDRQNVIFRLRCSKGTYVRSLCA
DFGKALGSCAHLTALRRDSIGEYTSDDAWEFQELEEAITKGYL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtcagcagtaattcctcgcatgtctctcatgttcctccactccaaatccatg
tcttccttctctaaacctcgcgccattatcttctttccctcaaagctcaaatcccacttt
ttctctacaacttcaactccttatccacttcaatacgaaatgattatctcccgcccttca
actatccaacaacaacgcttccttcccaattctaaacctactgattcccaacccgaaccc
gaacccggttcagaactcgggttcgacgattgggtcgaaagaaaactgaattctaaatca
tcttctgaggaacccaattcgggtattgtgaaaatggataaagggaaaaggaaatattat
aataagagaaggaaaagaatgtttggtgggtctgattctgatgatgaggagaataacagg
gataaggataatgagtttgttgagttaaagcaagaagttgtggagctacgtacattgcac
aagaaggaagaagagttgtacttttatgataattttgcttatccttgggagaaagataag
cattataagatggtttatcaattggaaaagaagtattttcctgatcagtgttttgataag
gcttttcttgaaccgggggagtcgaatgagaatgtaaagaagagtagaaagaaagtgggg
aaaagggaaagtataatagcaagggctattgatgatggggttgataaaaatttgatcttt
tttgaggaagaagaaaagggtgtgagtgaaactaaggagcaagttaaagttgatgtagcg
gaaaagaaagtggaagagttctttaagtgtttgaagaaggttccaaataaggaaagtggt
gttgttagtgctgagccgtttttagcgactaggagtacagggcttcctcctaaatgggat
agtccgggtgggacggtggtattagtgaacaaaccgaaaggttggacttctttcactgtt
tgtggaaagttgcgtcggctaacaaaagtgaaaaaggtgggccatgctggaacacttgat
cctatggcaactggcttattgattgtatgtgttggcaaagctacaaagatcgtggacagc
tatcagggtatgatgaagggctacagtggaatcttccgtttgggggaggccacctctacc
tgggatgcagattccccggttatgcaacgagagccatgggagcatatcaaggacgaggac
ataaagaaaacagcagcatccttttatggagagatatggcaagtccctccgatgttctca
gcaatcaaagttggtggtgaaaagatgtatgacaaagcaagaagaggagaaagcatcgaa
ctttcaccgaggaggatttcgattttcgaatttgacgtgaagcggagtttagatgacaga
cagaatgtgattttccgattaagatgctcaaaaggtacctatgtccgatcactttgtgca
gacttcgggaaagctcttggcagttgcgctcacttgacagctttacgacgagattcaata
ggagagtatacatcggacgatgcttgggaatttcaagaattggaagaggcaatcactaaa
ggatacttgtaa
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