Lycium barbarum (goji berry): 132623110
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Entry
132623110 CDS
T09483
Name
(RefSeq) probable pectate lyase P18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132623110
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132623110
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
132623110
NCBI-ProteinID:
XP_060193802
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Position
12:complement(105086960..105089213)
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AA seq
401 aa
AA seq
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MSSLFFTFVLLLLTPLVLSIQDPELVVQDVHRSINASMTRRNLGYLSCGTGNPIDDCWRC
DPNWEKNRQHLADCAIGFGKNAIGGRNGRIYVVTDSGDDDPVNPKPGTLRHAVIQDEPLW
IIFKRDMVIQLKQELVMNSFKTIDGRGTSVHISGGPCITIHQVSNIIIHGINIHDCKQSG
NGNIRDSPEHSGYWDISDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITISNNY
FTHHDKVMLLGHSDSYTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY
AIGGSAAPTINSQGNRFLAPNEKFRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFRQT
GAVASSNTYARASSLSARPSTLVGTMTTNAGPLSCKKSSRC
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtcttttcttcacatttgtccttcttcttctgaccccactagtactttcaatc
caagatccagaacttgtcgtacaagacgttcataggagcatcaatgcgtcaatgacaagg
aggaacttgggctatttatcgtgtggaacagggaatcctattgatgattgctggcgatgt
gaccccaactgggagaaaaatcgccagcatttagctgattgtgccattggctttggaaag
aatgctattggaggaagaaatggtcgaatttacgtggtcactgattcaggagacgatgac
cccgtgaaccctaaacccggaacccttagacatgccgttatacaagatgagcctttatgg
atcatttttaaaagggacatggtcattcaactaaaacaagagcttgtcatgaactctttc
aagaccatagacggtcggggcactagtgttcacatttcaggtggtccttgcattacaatc
catcaagtctcaaacattattatacacgggattaatatacacgactgtaagcagagtggt
aacggcaacatcagggactcacccgagcactccggatattgggatatttccgatggagat
ggcatttcaattttcggagggaagaacatttgggtggaccattgttcattgtcgaattgc
cacgatggtctaattgatgctattcacggatctacagcaatcacgatttctaacaactac
tttactcatcatgataaggtcatgttattgggacatagtgattcgtatacacaggacaaa
ggcatgcaagtcacagttgcttttaatcattttggtgaagggttggtgcaaagaatgcca
aggtgtagacatggttacttccatgtggtgaataatgactatacccactgggaaatgtac
gccattggtggtagtgctgcccctaccattaacagccaaggcaataggtttcttgctccc
aatgaaaaattccggaaagaggtgacaaagcatgaggatgcaccagaaagtcagtggaga
agctggaactggaggtcagaaggtgatttgatgttaaatggagcctatttcaggcaaact
ggggctgttgcatcatcaaatacttacgccagggcttcaagcttaagcgctaggccttcc
acattggtcggaacaatgaccacaaatgccggtcctctcagctgcaaaaaaagctcccgt
tgctag
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