Lycium barbarum (goji berry): 132623236
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Entry
132623236 CDS
T09483
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132623236
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132623236
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
132623236
NCBI-ProteinID:
XP_060193951
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Position
12:71925416..71927284
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AA seq
384 aa
AA seq
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MASLALVLTLLFLSISTLEAGYYAPTPYKSYNYAPSTKKTMNVIDSCWRTKSNWAKNRKA
LANCAVGYGKAAIGGKSGAIYVVTNPADDPVNPKPGTLRYGVIQTKPLWIIFSKNMVITL
KNELMINSFKTIDGRGAKVEIAYGPCITIQRVSHVIIHGISIHDCKPGKKGIVRDSPTHA
GRRNGADGDGIVMFASSNIWIDHCYLARCADGLIDVIHASTGVTISNNYFTKHDKVMLFG
HNDNNKEDKAMKVTVAFNYFGPGLIERMPRVRLGYAHVANNRYEKWLMYAIGGSANPTIF
SEGNYFLASKHTEVTKREAKSGWKKWKWRSSKDKFMNGAYFIQSGYGSTNPYYTKAQSFP
VADGSSVPSLTAEAGPLRCTTYKC
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttagcacttgtacttactcttctttttttgagtatctcaactttagaagcc
gggtactatgcacctactccttataaaagttataattatgcacctagtactaagaaaact
atgaatgtgatcgattcttgttggcgtaccaagtcaaattgggctaagaaccgtaaggca
ttggccaattgcgcggtcggctatggcaaagcagccatcggagggaaatccggtgccatt
tacgtcgttactaatccggccgatgaccccgtaaaccctaagccaggtacactaagatat
ggtgtaatccaaaccaaaccactatggattattttttccaagaacatggttataacgcta
aagaatgagcttatgatcaatagttttaagactatagatggaaggggagcaaaagtggag
attgcatatggaccttgtataacaattcaacgtgttagccatgttattatacatggtatt
agcatccatgattgtaagccggggaaaaaaggcattgtaagggatagtccaacgcatgct
ggccgccgtaatggcgccgatggagacggcattgttatgtttgcatcctcgaatatttgg
atcgaccattgttatcttgcacgttgcgccgatggacttattgacgttattcatgcttct
actggtgttaccatctccaacaactacttcactaagcatgataaagttatgttgtttggg
cacaatgataacaataaagaagacaaggctatgaaagtcacagtagccttcaactacttt
ggccctggtttaattgaaagaatgccaagagtgaggctaggttatgctcatgtggccaac
aatcggtacgaaaaatggttaatgtatgctattggtggaagtgctaatccaaccatcttc
agtgaaggaaactatttcttggcatctaaacacacagaagttacaaagagggaagctaag
agtggttggaagaaatggaagtggaggtcttcaaaggataaattcatgaatggagcctat
tttatacaatctggttatggaagtactaacccatattacacaaaggctcagtcatttcca
gtagctgatggatcatcggttccttctttaaccgctgaggcaggacctttgcgttgcact
acgtataaatgttaa
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