Lycium barbarum (goji berry): 132623307
Help
Entry
132623307 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132623307
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132623307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbb03009
]
132623307
Enzymes [BR:
lbb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
132623307
Ribosome biogenesis [BR:
lbb03009
]
Eukaryotic type
90S particles
Other 90S particles
132623307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
132623307
NCBI-ProteinID:
XP_060194062
LinkDB
All DBs
Position
1:complement(157470453..157474865)
Genome browser
AA seq
274 aa
AA seq
DB search
MVRPYKVKGEKRKKKEENYDKEEEIEQSESAKRVKTEHTVADTEAAERVVDLLAGIPVVS
TDQSTKPGVIFIIERASLEIAKIGKTYQLLNSDEHSNFLKKNNRNPSDYRPDIAHQAMLT
ILDSRINKAGRLKALYVRTEKGVLFEVKPHVRIPRTFKRFAGIMLQLLQKLSITAVGKRE
KLLRVIKNPVSQYLPIDCRKIGFSHSSEKLVDIQDYVNGISNDMNLVFMVGAMAHGKIDK
EYVEDYISVSDYPLSAAYCISMITNAVERKWKIL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggccttataaagtgaaaggggaaaagagaaaaaagaaagaagagaattatgat
aaagaagaagaaatagagcaatccgagtcagcaaaaagagtgaaaacagaacacactgtt
gcagatactgaggcagctgaaagagttgtagatttactagctggaataccagttgtttca
actgatcaaagcactaaacctggtgttattttcataattgagagagcctctctcgaaatt
gctaaaattggaaagacttaccagcttctgaactcagatgaacattccaactttctgaag
aagaataatcgcaacccttctgattatcggcctgatattgctcatcaggcaatgcttaca
attttagatagccgaataaataaagctgggcgattaaaagcgttgtatgtgaggactgag
aaaggcgtgctctttgaagtaaaacctcatgttcgtatccctaggacatttaagcgattt
gctggtatcatgttgcagctgctacaaaagctgagcataactgctgttggtaaacgagag
aaactgttacgtgttataaaaaatcctgtttcacagtacctacccatcgactgccggaag
atcggcttctctcatagttctgagaaactggtggatattcaggactatgttaatggaatt
agcaatgacatgaaccttgttttcatggttggggcaatggcccatggaaaaattgataaa
gaatatgtcgaagattatatatcagtttccgattatccattaagtgctgcatactgcata
tctatgatcacgaatgctgtggagcgcaaatggaaaattttgtag
DBGET
integrated database retrieval system
