Lycium barbarum (goji berry): 132623630
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Entry
132623630 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132623630 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132623630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbb03041
]
132623630
Spliceosome [BR:
lbb03041
]
Complex C
Other components
Step II factors
132623630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
WD_LRWD1
eIF2A
Beta-prop_NWD2_C
Beta-prop_WDR75_2nd
Beta-prop_Vps41
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
132623630
NCBI-ProteinID:
XP_060194395
LinkDB
All DBs
Position
12:complement(86081662..86086210)
Genome browser
AA seq
583 aa
AA seq
DB search
MDLIQSYDDDEIPKSPNPNSDQNPSPDSSPVRILPSKSAAPKVDDTMLALTVAGGAARAQ
SKPLDPTQHLVGFNPTYEQLWAPIIGPAHPYAKDGLAQGLRNHKLGFVENASIEPFVFDE
QYNTFQKYGYAVDPSENSYIGDLEKMKECDAISVYNVAQREQKKRKLEKKKEKMEEEGDE
VDVDVSEVENPSTDTWLMRNRKSPWAGKKEGLQVELTEEQKKYAEEYAKKKSEERGGDRE
KAEPLLEKSTFHGKEEKDYQGRSWIAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRF
FPKHGHLILSAGMDTKVKIWDVYNSGKCMRTYMGHSKAVRDIWFSNDGSKFLTASYDKYI
KYWDTETGQVIQTFTTGKIPYVVRLNPDEDKQNVLLAGMSDKKIVQWDINSGQITQEYDQ
HLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISPHPNGNWI
AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVLSGDGEGRCWFWD
WKSCKVFRTLKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggatctcatacaatcctacgatgatgacgaaatccccaaatctccaaaccctaattcc
gaccaaaacccttcacctgattcttccccagtccgcatccttccttctaaatccgccgcc
cctaaagtcgacgacaccatgttagccctaacagttgccggcggcgctgccagagctcaa
tccaaaccccttgacccgacccaacacctcgtcggattcaacccgacttacgaacaacta
tgggccccaattatcggtccagctcacccctatgctaaagacgggttagcccaagggctc
cgaaatcataaattagggtttgttgaaaacgcgtcaattgaaccgtttgtgtttgatgag
cagtataatacttttcagaaatatgggtatgctgttgatccttctgagaatagttatatt
ggtgatttggagaaaatgaaggaatgtgatgcgatttcggtgtataatgtagcacaacgt
gaacagaagaagaggaaattagagaaaaagaaggaaaaaatggaggaggaaggtgatgag
gtggatgtggatgtatcggaagttgagaatccgtcgactgatacgtggttaatgaggaat
aggaagagtccatgggctggaaagaaagaagggttacaagttgaattaactgaggaacag
aaaaagtatgctgaagagtatgctaagaagaagagtgaagaaagaggcggcgatagagaa
aaggcggaacctttacttgaaaagagtacatttcatggtaaagaggaaaaagattatcag
ggtaggtcgtggattgcgccacctaaggatgcaaaggctgctaatgatcattgttatata
ccgaaaagattggttcatacttggagtggacatacgaaaggggtttcagctattagattt
ttccctaagcatggtcatttgattttgtcagctgggatggatacaaaggtgaagatttgg
gatgtttacaattccggtaagtgtatgaggacttacatgggacattcgaaagcagtgagg
gatatttggtttagtaatgatgggtcgaagtttttgacagcttcgtatgataagtacatt
aagtattgggatacagaaacaggacaagtgatccaaacgttcacgacgggtaagataccc
tatgtggtgaggcttaaccctgacgaggataagcagaatgtacttttggctggtatgagt
gacaagaagattgtgcagtgggatataaacagtggacagattacacaagagtatgatcaa
catctgggggcagttaatacaattacctttgtggataataataggaggtttgtgacctct
agtgatgataaatcacttcgtgtttgggaatatggtattccggttgttattaagtatata
agtgaaccccatatgcattccatgccgtctatttcgccccatccaaatgggaattggatt
gcagcacaaagtttggataatcagattcttatttatagtacgcgagagagatttcagctg
aataaaaagaaaagatttgctggacacattgtcgctggttatgcttgccaggtcaatttt
tcacctgatggacggtttgtcttgtcaggagatggtgaaggcagatgctggttttgggat
tggaaatcgtgtaaggtcttcagaactctcaaatgtcatgaaggggtctgtattggtgca
gagtggcatcctctggaacaaagtaaagttgctacttgtggttgggatggtttgatcaag
tactgggactag
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integrated database retrieval system
