KEGG   Lycium barbarum (goji berry): 132623857
Entry
132623857         CDS       T09483                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    132623857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lbb03400]
    132623857
DNA repair and recombination proteins [BR:lbb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     132623857
SSDB
Motif
Pfam: XPG_N XPG_I UBM
Other DBs
NCBI-GeneID: 132623857
NCBI-ProteinID: XP_060194649
LinkDB
Position
12:67328282..67339106
AA seq 1576 aa
MGVQGLWDLIAPVGRRVSVETLAGKKLAIDASIWIIQFMKAMRDEKGEMVRNAHILGFFR
RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLLNHLKAMRLK
EQSVDLENQRKQTDAKGKKVITEATGTMKNMAEGNGLVTENYDKEALDEMLAASIQAEED
GNFAEDASTSCAGASAENDNSDEDEEMILPAMQGKVDPSVLAALPPSMQLDLLGQMRERL
MAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREISEVQKSAAGRGIGGVRTSRIASEA
NREFIFSSSFTGDKDVLASAGDDQTSKKPSAVQTENNLANAASVAATRKSSSVLESIVTE
PEREFNDDVETYLDERGNIRVSRLRAMGVRMTRDLQRNLDLMKEIEEESMTRNKDSSDVP
TVSDTAVHSPGNVSDTISHLNSSNPDDDGKACLNNKSKESELRSGTTIQISFEDKFEHDC
ANDDDDIFARLVAGDPVMEFPMDHSPSKKQSLDSASDVEWEEGVIEEKGDLLSNDSQGEG
QAPLDKDGMDDEAEVEWEEGCLDIREEPSLLPSDSRSAYKGALEEEANYQEAVRRSLEDL
RDHRSIDKFHEKEMSKEAIQMVTQGTSIESVGQENYCPNTHENLQQKDLSPEIQTPDLHG
TVHEMDIAGSNNCLGTPLGEQFQANSGDRNMQIENATSHADRNLQIEKATSHTDRNYCDI
HMEPTIPLDGSEVDMIKKKIADTTVEVSSNTRSASHVTSIEQSTFNDLPNASTSDAQQYE
SGAASHHYTHESTELIKAFSEGFITDIDSAQNLDEEVACDGPLFGGRDLLGNLDSAGSKE
DQKVMMASLEEEMQVLDKEREKLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAP
MEAEAQCAYMELTNLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKDVENELGLD
REKIIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREWVESPDPSILGGLDA
QAGSSSRKRGCKVGDPDMSCSTSNLEGNTASDENVHRSEDRADKLKQIFMNKHRNISKNW
HIPSSFPSSAVISAYVSPRVDKSTEPFAWGKPDVSVLRKVCWEKFGWTSQKADELLLPVL
KEYNKHETQLRLEAFYSFNERFAKIRSKRIKKAVKYMTGNKSSDLMHGSVRDAPGSSKKS
VVKSNDMNEEKIEDPLRGPDYEETETKRSAVGKKSRKRKGEHLQPEHLEPPEGEGSKRNA
SKKSSGSIGGRKTAGSVGKASKKSCSRSSKASFEGETDSDIEQQSQIEKLEKPNQSRRSE
RHRKILNYSDLRDDESDEADKDGGDSATEKLERRESGADVGIAECYPADSSKMNENNASN
DYSPQELSNLETGAGVETGGTERESTVKPSFGETYDPVPGDLLSKEYLKMGGGFCLEEDD
GDMEHETKAYKEECLKMGGGFCLEEDDRDTAHETKATSPILSVECSDIYSSSQLLGDENS
GNASNQLISSPSKKTSEKQCEAGIGASEIDQDLNNTTNTTCHKVSPHQENMENNDYAPSS
VFLRAMPNLRKRKKNS
NT seq 4731 nt   +upstreamnt  +downstreamnt
atgggcgttcaaggtctctgggatctcatcgcccccgttggccgccgcgtgtccgtcgaa
accctcgccggtaaaaaactggcaatcgatgcgagtatatggattatacaattcatgaaa
gcaatgcgagatgaaaagggagagatggtgcggaatgctcacattttgggatttttccgt
cgaatttgcaagttactctaccttcggaccaagccagtctttgtatttgatggcggcaca
ccagccctgaagcgtagaacagtgatcgcgcgtcgacgccagcgggaaaatgctcaggcc
aaaattaggaaaactgctgaaaaattgctcctcaatcatcttaaggcaatgaggctcaaa
gagcagtctgtggatctggagaaccagaggaaacagactgatgcaaagggtaaaaaggtt
atcacagaggcaactggaactatgaagaacatggccgaaggaaatggcttggtcacagag
aattatgataaagaagcactggatgagatgttggcagcttctattcaagcagaggaagac
gggaattttgctgaggatgcatcaacatcttgtgctggggcttctgctgaaaatgataac
tccgatgaagacgaagagatgatactgccagcaatgcaaggaaaagttgatccttctgtt
ttagctgctttgcctccatcaatgcaacttgatcttcttggtcagatgagggagagattg
atggcagagaacagacaaaagtatcagaaggtcaagaaggccccggaaaagttctcagaa
ctgcaaatacaagcttatctgaaaactgttgctttccgtcgcgagataagtgaagtgcag
aaatctgctgctggaaggggaataggcggtgttcggacttcaaggattgcttctgaagca
aatagggagttcattttctcctcgtcttttactggggacaaagatgtccttgcatctgct
ggggacgatcaaactagtaagaagccaagtgcagttcagacagaaaataatttggcaaat
gctgcgagtgttgctgcaacaaggaaatctagtagtgtgctagaatcgattgtgactgaa
cctgaaagggaatttaatgatgatgtggagacatatctggatgagaggggtaatattcga
gtcagcagactgagagccatgggtgttcgcatgactcgagatttacagagaaatttagat
ttgatgaaagagatagaggaggagagtatgaccagaaacaaagattctagcgatgtgcct
accgtaagtgacactgctgtacattcccctggaaatgtctctgatacaatttcgcatttg
aactcatccaatccagatgatgatgggaaggcttgtttaaacaacaaaagtaaagagtct
gagttgagaagcgggactacaattcagatatcttttgaagataagtttgaacatgattgt
gccaatgatgatgatgatatatttgcgcgtttagtggcaggtgatccagtgatggaattt
cctatggatcattccccctcaaagaaacagtctctagattctgcttcggacgttgagtgg
gaggaaggagtgattgaagagaaaggtgacttgctaagcaatgactctcaaggggaaggt
caggctccactggataaagatggcatggatgatgaggctgaagtagaatgggaagaagga
tgtttagatattcgcgaggagccttcgttacttccatcggattcaagaagtgcttataaa
ggtgctttggaagaagaagccaattatcaggaagcagtaaggaggagtcttgaggatttg
agagatcatagatccatagataaatttcatgagaaagagatgtccaaagaagctattcaa
atggttactcagggtactagtattgaatctgttggtcaagagaactattgtccaaataca
cacgaaaatcttcaacagaaagatttatcacctgaaattcagactcctgacttgcatggt
actgtacatgagatggatattgcagggagtaataactgtttgggtacccctttgggagaa
caatttcaagctaattctggtgacagaaatatgcagattgaaaatgcaaccagtcatgct
gatagaaatttgcagattgaaaaagcaaccagtcatactgacagaaattattgtgatata
catatggaaccgaccattccacttgatggatcagaggttgacatgattaaaaagaagata
gcagataccactgttgaggtttcgagtaacacaagaagtgcttcacatgttacttctata
gaacaatcaacatttaatgatttgccgaatgcaagtacctctgatgcccaacaatatgaa
tctggagctgcctcacatcattatacacatgagtcgacagaactcatcaaagctttcagc
gagggttttataactgatattgatagtgcacaaaacctagacgaggaagttgcttgtgat
ggcccattatttggaggaagggatctcttgggcaatttggattctgcaggtagcaaagaa
gatcaaaaagttatgatggctagtttggaggaggagatgcaggtattggataaagagcgt
gaaaaactaggagatgagcagagaaagcttgagcgtaatgcagagtctgttagctctgaa
atgtttgcagagtgccaggagttgctccaaatgtttggcttgccctatatcatagctcca
atggaagctgaagcccaatgtgcttacatggaacttacaaatcttgttgatggtgtggtt
actgatgactctgatgcgttcttgtttggtgctcgaagtgtatacaagaacatatttgat
gatcgcaaatatgtagagacatactttatgaaggatgtggagaatgagcttgggttggat
agagaaaagataattcgtatggcattgctccttgggagcgattatactgaaggagtgagt
gggattggtattgttaatgccattgaagttgtaaatgcatttcctgaggaagatggtctt
cagaaatttcgtgagtgggtggaatcgccagatccatccattctcggggggcttgatgca
caggcaggttccagctctaggaagagagggtgtaaagttggtgatcctgatatgagttgc
tcaaccagcaatcttgaaggcaatactgcatctgatgagaatgtccacaggtccgaggac
agagctgacaagttgaagcagattttcatgaataaacatagaaatattagtaaaaactgg
catattccttcttcgtttccgagtagtgctgtaatttcagcatatgtgtctccgcgagtt
gacaagtcaacagagccttttgcatgggggaagcctgatgtttctgttcttcgcaaagtt
tgttgggagaaattcggctggaccagccagaaggcagatgaattgctactaccggttctg
aaagagtacaacaaacatgagacacaacttcgactggaagccttctactccttcaatgag
agatttgcaaaaattcgtagcaagaggataaagaaggctgttaaatatatgacagggaac
aaatccagtgatttaatgcatggaagtgtacgagatgctcctggaagctctaaaaaaagt
gtagtaaaatctaatgatatgaatgaggaaaagatagaggatcctctgaggggacctgat
tatgaggagactgaaacaaaaagaagtgcagttggaaagaagtcaagaaaaaggaaagga
gagcatttgcagcctgaacatttggaaccaccagagggagaaggaagcaagagaaacgcc
agtaagaaatcaagtggtagtataggaggacggaaaacagctggatctgtggggaaggca
agtaagaaatcctgttccagatcctccaaagcaagcttcgagggggaaacagatagtgat
atagagcaacaatcacaaattgagaaacttgaaaagccaaatcaatctagaagatcagag
cgtcatcggaaaatactaaattacagtgatttgagagatgatgagtctgatgaagctgac
aaagatggtggagattctgctactgaaaagttagaaaggagagaatcaggagcagatgtg
ggcatagctgaatgttatcctgctgattctagtaagatgaatgagaacaatgcaagtaat
gattactctcctcaagaattgtcaaaccttgaaacaggtgctggtgtcgaaacaggtggg
acagagagggaatctactgttaagccaagttttggtgaaacttatgatcctgttcctggg
gatcttttgtctaaggagtaccttaaaatggggggtgggttttgcttagaggaagatgat
ggagatatggagcatgagacaaaagcttataaggaggagtgccttaaaatggggggtggg
ttttgcttagaggaagatgatagagatacggcgcatgagacaaaagctactagccctatc
ttatcagttgagtgttctgatatttatagttcttctcagcttttgggagatgagaattct
ggtaatgcttcaaaccaattgatttctagcccctcgaagaaaacgagtgagaagcaatgt
gaagcagggataggtgcatctgaaattgaccaagatttaaacaacacaactaatactact
tgtcacaaggtgtcaccgcaccaagaaaatatggagaacaatgattatgcgcccagttca
gtatttcttcgtgcaatgccaaatttgaggaagcggaagaagaatagctga

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