KEGG   Lycium barbarum (goji berry): 132624859
Entry
132624859         CDS       T09483                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132624859
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lbb03041]
    132624859
Spliceosome [BR:lbb03041]
 Complex A
  U2 snRNP components
   U2 related factors
    132624859
 Complex B
    132624859
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 132624859
NCBI-ProteinID: XP_060195583
LinkDB
Position
12:57741157..57754561
AA seq 547 aa
MADNGEDIDKSRNPHDDSNPQHSSRENEKDRDSSRSREKDRGRDRDRDRDRDRDRDRGRE
RDKDRDREREKDRDRHHRDRHRDRSDRRERERTRDRDDDERHRTRDYDKQRDHDKDRESR
HRHRSRSRGRSEHRSRSRSRSRSKSKRMSGFDMAPPSTAMLPGATAAAGQVPGTNPAIPG
MFPNMFPLASGQFGALPLMPVQAMTQQATRHARRVYVGGLPATSNEQSVATFFSHVMSAI
GGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGAPCKVRRPSDYNPS
LAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLR
GFDLVKDRETGNSKGYAFCVYSDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPKPEQ
ESVLLHAQQQIALQRLMLQPGALATKVLCLTQVVEVDELSNDDDYQDILEDMRTECGKFG
SLVNVVIPRPSPNGEPTPGVGKVFLEYGDVDSASKARQSLNGRKFGGNQVVAVFYPENKF
YEGDYDG
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggcggacaatggagaagacatagacaaatccagaaacccccatgatgactccaaccct
cagcatagttctcgtgagaatgaaaaagatagggactcatcaagaagcagggaaaaggat
agggggcgtgatagggaccgggatagagacagagaccgggacagggacaggggtagggaa
agagacaaagacagggacagagagcgggagaaggaccgtgatcgtcatcacagggatcgt
catagggatcggagtgacagaagggagagggagagaaccagagatagagatgatgatgaa
cgccatcgaactcgagattatgacaagcaaagagatcatgacaaagatagagagagtcgg
catagacataggtctcgctcaaggggtagatctgagcatagatcaaggtctcgatcgcgt
tctcgatccaagagcaaaaggatgagtggttttgatatggcacctcctagcactgcaatg
ttacctggcgctacagctgctgcaggtcaagtccctgggaccaacccagcaattcctgga
atgtttcctaacatgtttcctttagcatcgggccagtttggagctcttcctcttatgccg
gtccaggcaatgacacagcaggctactaggcatgctcgacgagtttatgtcggtggactt
cctgctacttcaaatgaacagtctgttgcgaccttctttagtcatgttatgtctgcaatt
ggcggaaatacagctggtccaggggatgctgttgtcaatgtctatataaactatgagaag
aagtttgcttttgttgaaatgagatctgtagaggaagccagtaatgccatggcattggat
ggcatcatatttgagggtgcaccctgtaaggtcagaagacccagcgattacaacccttct
ctggctgctactcttggtcctagccaaccaaacccaaacctcaacctggcagctgttgga
ttgagccctggttctgcaggagggcttgaaggtcctgatcgcatttttgttggtggtttg
ccctactatttcacagaagctcagatcagagagctgttagagtcttttggtccacttaga
ggatttgatttggtcaaagatagagaaactgggaactcaaaaggctatgccttttgtgtc
tattcggatgtttccgttactgatattgcttgtgcagctctcaatgggattaagatgggt
gataaaacccttactgttaggcgtgctaaccagggtacgacacaacctaaacctgagcaa
gagagtgtattgttgcatgcacaacagcagatagctttgcagagacttatgttacaaccc
ggtgcgttagccacaaaggtcttgtgcttaacacaagttgttgaggtagatgagctcagt
aatgatgatgactatcaagatattttggaagacatgagaactgaatgtgggaaatttggt
tcactggtgaatgttgttattccgcgtccaagtccaaatggtgagcccacaccaggggtt
ggaaaggtatttttggagtatggagacgttgacagtgccagcaaagctcggcaaagtttg
aatggaagaaaatttggtggcaaccaagttgtagctgtcttctatccagaaaacaagttc
tacgagggggactatgatggttag

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