Lycium barbarum (goji berry): 132624965
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Entry
132624965 CDS
T09483
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lbb01009
]
132624965
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132624965
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
132624965
Protein phosphatases and associated proteins [BR:
lbb01009
]
HAD phosphatases
Fcp/Scp phosphatases
132624965
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
132624965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
132624965
NCBI-ProteinID:
XP_060195707
LinkDB
All DBs
Position
12:complement(85285376..85295976)
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AA seq
961 aa
AA seq
DB search
MYKSVVVLYEGERLVGEVELNGVVWGEKVIRISHYSQSSERCPPLAVLHTITTGNGNGIS
FKLEPTKTLLNQDSSSPLFLLHSTCLRDNKTAVMSLGREELHLVAMQSRNIGGQCPCFWG
FKVASGLYDSCLTMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKINSESDPQRAS
AMLAEVKRYQEDKIILKQYAENDQVVDNGKVIKSQSEVFPALSDNHQPIVRPLIRLQDRN
IILTRINPMIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP
DSNLINSKELLDRIVCVKSGLRKSLFNVFQSGNCHPKMALVIDDRLKVWDEKDQPRVHVV
PAFAPYFAPQAEGNNSVPVLCVARNVACNVRGGFFKDFDEGLLQRISEVAYEDEIKQVPS
APDVSNYLISEDDPSAANGNKDSLGFDGMADNEVERRLKETMLASTSVPSQMTNLDPRLA
PALQHPVPPVISQPTIQGPVVSFPAQHLPQVTSVIKSSVTQISHQDTSLQSSPAREEGEV
PESELDPDTRRRLLILQHGQDTRDQVASEPKFSMGTPPLQVSVPPRVQPQGWFPVEEEMS
PRQLNRALPPKEFPLNSESMHINKHRPPHPPFLSKMESSVPSDRVLFESQRLPKEVIPRD
DRMRFNQSQPSFHPMPGEEISLGRSSSSNRDLDLEPGHYDPYLETPAGALQDIAFKCGTK
VEFKSGVLSSPELQFSLEVSFAGEKIGEGFGRTRKEAQRQAAEESLMNLADKYLSRLKPD
SSSTLGDGFRFPNASDNGFIDNMSSFGYQSYPREDRVSHSFASEPPRVLDPRLEVFKKSV
GSVGALRELCAIEGLGLAFQTQPQLSAIPGQKSEIYAQVEIDGQVFGKGIGSTWDDAKAQ
AAERALVALKSELGQFSNKRQGSPRSLQQGFSNKRLRPEYSRGVPRVPSSGRFLKNPSAM
P
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatcggtggtggtattgtatgaaggagagagattagtgggagaagtggaattg
aacggtgtcgtatggggggagaaggtaataagaatatctcactattcgcaatcaagtgag
agatgtccaccacttgcagtgctacacacaattactactggaaatggaaatggaataagc
ttcaaattggaacctacaaagacgctgttgaaccaagactcatcatcgccgctctttctt
ttgcattccacgtgtctcagagataacaagactgcagtgatgtcacttggaagagaggag
cttcatttagtcgccatgcagtctagaaatattggtggacagtgtccttgcttttgggga
tttaaggttgcatcagggctttatgattcttgtctaacaatgctaaacctcaggtgtctt
ggcattgtatttgatcttgatgagacactcatagttgccaacacaatgcgttcatttgag
gatagaatagaggccttgcagcggaaaataaattcagagtcagatccgcagcgtgcctct
gctatgctggctgaggtcaagcgttatcaggaggataaaattattttaaagcaatatgcc
gaaaatgatcaggttgttgacaatggaaaggtgatcaaatctcagtctgaggttttcccc
gcgctgtctgataatcaccaacctattgtcagacccctgattaggttgcaagatagaaac
attattcttactcgtattaatccaatgatccgcgataccagtgttctcgtgagattgaga
cctgcatgggaggatctccgaagctatctgactgcaaggggtcggaagcgctttgaagtt
tatgtatgcacaatggctgaaagagattatgctttagaaatgtggcggcttcttgatcca
gattcaaacttgattaactcaaaagaactcttggatcgtattgtctgtgtcaagtctggc
ttgaggaaatctttgttcaatgtattccaaagtggaaattgtcatcctaagatggcattg
gtgattgatgatcgcttgaaagtgtgggatgagaaagatcaaccacgagtgcacgttgtt
cctgcatttgctccatattttgcacctcaagctgagggcaacaattctgttcctgtcctt
tgtgttgccagaaatgtagcctgcaatgtcagaggtggtttcttcaaagattttgatgaa
ggcctattacagcgaatatctgaagttgcatatgaagatgaaattaagcaagttccttct
gcgcctgatgttagcaactatttgatttcggaggatgatccttcagctgcaaatgggaat
aaagattcacttggatttgatggaatggctgataatgaggtcgaaaggagactaaaggaa
acaatgttggcttcaacaagtgttccgtctcaaatgacaaatttggatccaagacttgca
ccagctctccagcaccctgtcccacctgttatttcacaaccaaccattcaagggccagtg
gtgtcttttcctgctcagcatctccctcaagtgacttctgtaattaaatcatcagtgact
caaataagtcatcaggacacaagtttgcaaagttctcctgctagggaagagggtgaggtg
ccagaatctgaattagatcctgatacaaggaggagattacttatattgcaacatggtcaa
gacacgagagatcaagtagcaagtgaaccaaagttttctatggggactcctccattacaa
gtgtctgtaccacctcgggtgcagccacagggttggtttccagttgaggaagagatgagc
cctaggcaacttaatcgagccttacctcccaaggaatttcctttaaattcagagtctatg
catattaacaaacatcggcctcctcatccgccatttctttccaaaatggagagctctgtg
ccatctgatagagttctttttgagagccagaggctgccaaaagaggtaatccctcgggat
gacaggatgagatttaaccagtcacaacctagctttcatcccatgccaggtgaggaaatc
tccttgggtcggtcatcttccagcaacagggatcttgaccttgaacctggacattatgat
ccatatttagaaacacctgctggagctttacaggatattgcattcaagtgtggaacaaag
gtcgaattcaaatcaggtgtactttcaagtccggaactgcagttctccttggaggtgtcg
tttgcaggagaaaaaattggagaaggatttggccggacgagaaaggaagcacaacgacag
gctgctgaggaatctcttatgaatctggcagacaaatacttgtcacgtctcaaacctgat
tccagttccacactgggtgatggatttaggtttccaaatgcaagtgataatgggtttatt
gacaacatgagttcttttgggtatcaatcatatccgagggaggatcgtgtctcacattct
tttgcatcagaaccccccagagtgttggatccaaggcttgaggtttttaagaagtcagtg
ggttcagttggcgccctaagagaactttgtgcgattgaaggacttggtttggcattccaa
actcagcctcaactctcagctattccgggccagaaaagtgaaatatatgcccaggtggaa
atagatggacaagtatttggcaaaggaattggttcaacatgggatgatgctaaagcacag
gctgctgaaagggctcttgttgctttaaagtcagagctgggtcagttttctaacaagcgt
cagggttctccaaggtcattgcagcagggattttccaacaaaagattgagacctgagtat
tctcggggtgtgccgcgagtaccatcttctggtagattcctgaagaacccttccgctatg
ccatga
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