Lycium barbarum (goji berry): 132625133
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Entry
132625133 CDS
T09483
Name
(RefSeq) LOW QUALITY PROTEIN: nibrin homolog
KO
K10867
nibrin
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132625133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbb03032
]
132625133
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132625133
DNA replication proteins [BR:
lbb03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
132625133
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
132625133
BRCA1-C complex
132625133
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
PTCB-BRCT
Nbs1_C
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
132625133
NCBI-ProteinID:
XP_060195935
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Position
12:70411025..70476980
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AA seq
564 aa
AA seq
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MVWGLFPIDPLPGEDNYYFFNKGTYKVGRKGCDVIVNKDKGVSRIHAEILIDEMISLDQS
LKKPSNILSKVRIRDCSKYGTFLSKNMDSKEKVHEFPNKETMLKDGDLVSFGTGNATYRF
SYVSFIFFICSPKHSKTNQLITKKVSSIGASISKKWSLDCSHVLVDDSFPLSEDLIDAIV
ARKPLVQYSWVELIAGKTLCTDIPSCSSHAPKLMLEGVSGKVVDPQSRECCLKGYTFLLE
PENKYKFEGRLQSLLEVGGASISSAEMALEKDGNDRLVCVVPAGSSSFKCFSNHSSLPSV
SEIDLVSAVLSGYLDPSLITSPPVLVTSSCSTDETLVADSDAETESAKSDHIAAAVCSID
TSEHDSKRTTSTHKLESVEYYNEDKCSVQIVIPSDNVSMRDTSPSSTKPDKHDGDHIPHD
DATIHDPEGSYIRRLGVKSDNTLAKEDITDERENGKLDIIYSQDLIVKDSIMSLPVSSST
KGGVTNFKRFRKANAPPQNSFEIFVPFSKYPYQESECKNEDIAESIKEEKKRKQMEAVAE
DLFNSEKGRRRGVAGSLHGLFARR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggcctttttcctattgatccacttccaggtgaagataattactatttcttc
aataaaggtacatataaagttggtcgaaaaggatgtgatgtcattgtcaacaaggataaa
ggagtttcaaggatccatgcagagattttaatagatgagatgatttctttggatcagtcg
ttgaagaaaccctcaaatattttgtctaaagtacgtataagagactgctcaaagtatggt
acattcctcagcaagaatatggattcaaaggagaaagttcatgagtttccaaataaagaa
acaatgcttaaggatggggatctagtttcttttggaactggtaatgcaacttacagattc
tcctatgtgtccttcatatttttcatttgctccccgaagcattcaaagacaaatcaactt
attacaaagaaggtatcatcaataggtgcaagtataagtaaaaagtggagtttggactgc
tcacatgtgcttgtagatgactcctttccactgagtgaggatctgattgatgctattgtc
gctagaaaacccttggttcaatatagttgggttgagctaattgcaggaaaaactctttgc
accgatattccaagctgcagttctcatgcaccaaaattgatgctggaaggagtgtccggg
aaagtggtagatcctcagtctcgggagtgttgtttgaaaggatatacatttttgctggaa
ccagaaaacaagtataaatttgagggcaggttgcagtccttactggaagttgggggtgcc
agcatttcttctgctgaaatggccttggaaaaagatggaaatgatcgtctggtatgtgta
gttccagcaggatcaagcagctttaagtgtttttctaaccatagttccttgccttcagtg
agtgagatagatctggtttctgcggttctttctggatatctggatccttctctaatcaca
tccccaccggtgctcgttacatcttcatgctccacagatgagacactggttgcagactca
gatgcagaaacagaaagtgcaaaatcagatcacattgctgctgctgtctgttcaatagat
acttcagagcatgacagcaagagaacaacttctacacacaaattagaatctgttgaatat
tataacgaagataagtgttctgttcaaatagttatacctagtgataatgtatccatgagg
gacacatctcccagttcaacaaaacctgataaacatgatggagatcacataccacatgat
gatgctaccatccatgaccctgaaggtagttacatcaggcgcttaggtgtcaaaagtgat
aatacactggcaaaagaagatatcactgatgagcgggaaaatgggaagttagacatcata
tatagccaagatttgattgttaaagattctatcatgtcattaccagtctcttcttcaaca
aaaggtggagttacaaactttaagcgcttccgtaaggcaaatgctccaccccagaatagc
tttgaaatcttcgttccgttctccaagtatccatatcaagaatctgagtgtaagaatgag
gatattgctgaatccattaaagaagagaaaaaaagaaaacagatggaagctgttgccgag
gacctgtttaacagtgaaaagggaagacgacgtggtgttgctggttccctgcatgggttg
tttgctcgtagataa
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