Lycium barbarum (goji berry): 132625250
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Entry
132625250 CDS
T09483
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132625250
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lbb01007
]
132625250
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132625250
Enzymes [BR:
lbb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
132625250
Amino acid related enzymes [BR:
lbb01007
]
Aminoacyl-tRNA synthetase
Class II (U)
132625250
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132625250
Prokaryotic type
132625250
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
132625250
NCBI-ProteinID:
XP_060196100
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Position
2:837771..856914
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AA seq
592 aa
AA seq
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MPTVSVGKDRLFEALGSTYTDDEFDELCFKFGIELDDITTEKAIQRKEKHLEEEGTDDDG
ETIYKIEVPANRYDLLCLEGLAQALRIFSGIDPIPTYKVADIGKDSMLEVHVKTETSKIR
PYVVCAVLRGVTFDEAKYNSFIDLQDRLHQNICRRRTLVAIGTHDLDTIEGPFTYEALPP
AEINFVPLKQTKKFKADELMEFYKSDLKLKKFLHIIENSPVYPVIYDCKRTVVSLPPIIN
GAHSAISLKTKNVFIECTATDLTKANIVLNTMVTMFSVYCERKFEVEPVKVTYPDGKSFV
YPDLSIYDMNVPLSYITGIIGVQLPEDKVASLLQKMQLRAEKSVSEDKEVKFVVSVPPTR
SDVLHPCDVAEDVAIAYGYNEIPKRKPASLKPLPLSQFSDLLRTEIAMAGYTEVLTFILC
SKKEISSMLNHEEDNSAVIIADSRTSEFEVVRPSLMPGLLRTVGHNKDHPKPIKIFEVGD
IVLLDGTNDVGAVNRRHLAALYCGATSGFELIHGLVDKIMEANGTNFVSPGDSAGYYIER
SEEPAFLQGRQASIIYRGNRIGTFGIVHPKVLKEFDIPDPCSFLELDMESLL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgccaactgttagtgttggaaaagaccgtttattcgaagccctaggttctacttacact
gatgatgaatttgatgaattgtgctttaagtttggtattgagcttgatgatataacaaca
gaaaaagcaattcagagaaaagaaaagcatttggaggaagagggaacggacgacgatgga
gagaccatatacaaaattgaagttccggcaaacagatatgatttgctttgtcttgaagga
ctagcgcaagctctccgaatatttagcgggattgacccaatcccaacgtataaggtggcg
gatattggtaaagattctatgcttgaagtgcatgtcaaaacagagacatccaagattcgc
ccatatgttgtatgtgctgtcttaagaggtgtaacatttgatgaggctaaatacaatagc
ttcattgatctacaagacaggctgcatcaaaacatttgcaggcgacgaaccttggttgca
attggtacccatgacctagatacaattgaaggacctttcacatatgaggctttgcctcct
gcagaaataaattttgtgccattaaagcagaccaaaaagttcaaagctgatgagctgatg
gaattttacaaatcggatttgaagctgaagaagtttctgcacataatcgagaattcacca
gtgtaccctgttatatatgattgcaaaaggactgttgtatctttaccccccattattaat
ggtgcacattcagccatttcactgaaaacaaagaatgtgtttatagaatgtacagccaca
gatttgacgaaggccaacattgttctgaacacaatggtaaccatgttttcagtgtactgt
gagcggaagtttgaagtcgaaccggttaaagtaacatatcctgatggaaaatcatttgtt
tatcccgatctctcaatctacgacatgaatgtgcctttgtcctacattactggtatcatt
ggagttcaattgccagaggataaggtggctagtttgttgcaaaaaatgcaattgcgtgca
gagaaatctgtatcagaagataaagaagtcaagtttgttgtatctgttcctcctacaaga
agtgacgttcttcatccatgtgatgtagcggaggatgttgctattgcttatggctacaat
gagatcccaaagagaaaacctgcatctttgaagcctttacctctcagtcaattcagtgat
ctactgcgtacggagattgcaatggctggttataccgaggtgttaacatttatcttgtgt
tccaagaaagaaatttcctccatgttgaaccatgaagaggataactctgctgtgatcatt
gctgattcccgtacttctgaatttgaggttgttcggcctagtctcatgcctggactattg
agaactgtggggcataataaggaccatccaaagcctataaagatttttgaagttggtgat
atagtcctattagatggcacaaatgatgttggtgcagtaaaccgtcgccaccttgctgct
ctgtattgtggcgcaacctcaggatttgagctaatacatggtctagtcgacaaaatcatg
gaagcaaatggtactaattttgtatcacctggagacagcgcaggctactacatagaaaga
tcagaggagcctgcatttcttcagggaagacaagctagcattatttacagaggaaatcga
attggaacatttggcattgtgcaccctaaggtcctcaaggagtttgacattccagatccc
tgctcctttctggagcttgacatggagtctctcctatag
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