Lycium barbarum (goji berry): 132625819
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Entry
132625819 CDS
T09483
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbb03000
]
132625819
Transcription factors [BR:
lbb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
132625819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
DUF7128
RtxA_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
132625819
NCBI-ProteinID:
XP_060196377
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Position
2:1926207..1934760
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AA seq
616 aa
AA seq
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MAAGPSSAVFLAMREEEQMKQQHELLLHQQQQQQQHALPPSSTAQSQQAPTKKRRNQPGT
PNPDAEIIALSPKTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRK
VYLCPEPTCVHHEPSRALGDLTGIKKHYSRKHGEKKYKCEKCSKKYAVQSDWKAHTKTCG
TREYRCDCGTLFSRRDSFITHRAFCDALAQESARNPPSLSSIGSHLYGSSNNNMSLGGLS
KINSQISSDHQDMLHFGGNNNNNMKNIASGGAHHHHHNQFDHNNNNHLIGSSTFRPSTSF
FQLPIDQTSHQSDYVMNNKPAIHGLMQLPDLHNNANSSSANMFNLNFFQNNNNVDNDNSN
ISGGGPGGLLLPSPHQFSNNNSGDGSNNSSNVFSAGTLLSDHHHHHMSSSIASLYGSSSL
HQNNATNSPAPPMSATALLQKAAQMGSTTSCNSSSTSASLLKAFGSVGGGGSSSSAMKSD
IHPPPGVNFSGVYGHDDSMGGGNHLHDLVVNAYGAQEQDHHQNDYGVIGGYNNKVNSYEQ
PPQKKQMINNFSMEMGSEQANRLTRDFLGVGEIVRSMSGGGFSSSSQQISSLDNNSESRK
TQSHRQPFGGATGNYQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaggaccttcatcagctgtgtttttagcaatgagagaagaagaacagatgaaa
caacaacatgaacttcttcttcatcagcaacaacaacaacaacaacatgccttaccacca
tcatcaacagctcaatctcaacaagcaccaacaaaaaagagaagaaatcagcctggcaca
ccaaatccagatgctgagataatagcactatctcccaagaccctaatggcgacaaacagg
tttgtgtgtgaggtatgcaacaaaggtttccaaagagaacaaaacctacagctacatagg
agaggacacaatttgccttggaagttaaagcagaagagtacaaaagaggttaagagaaag
gtttatttatgccctgagcccacttgtgttcaccatgaaccttcaagagcacttggagat
cttactggtatcaagaaacattattcaagaaaacatggtgagaagaaatacaagtgtgaa
aagtgttccaagaagtatgctgtccaatctgattggaaagctcatactaagacttgcggc
acgcgcgaataccgatgcgattgtggcacccttttctccaggcgtgatagtttcatcact
cacagagcattttgtgatgcattggcacaagaaagtgcaagaaatccaccaagtttgagc
agcattgggagtcatttatatggaagtagcaacaacaacatgagtttaggcggtctctcg
aaaataaattcccaaatttcatcagatcatcaagatatgcttcatttcggaggcaacaac
aataacaacatgaagaatatcgctagtggcggggcccaccaccatcatcacaatcagttc
gatcacaacaacaacaatcacctcattggctcatccacatttcgcccttccacctctttt
ttccagcttccaattgatcaaacaagtcatcaatctgattatgtgatgaataataaacca
gcaattcatgggctaatgcagcttcctgatcttcacaacaacgcgaattccagctcagct
aatatgtttaacctgaatttcttccagaataacaacaatgttgataatgacaatagcaat
atctctggaggaggtccaggtggtttattacttcctagtcctcatcaattcagcaacaac
aatagtggagatggttcaaataattcatccaatgtgttctcagctggtacccttctaagt
gatcaccatcatcatcatatgagttcatcaattgcttctctttatggctcatcatcactt
catcagaacaatgctactaattcaccggccccgccaatgtccgccacggcactactccag
aaagcagctcagatgggttctactacaagttgcaacagtagtagcactagtgcctcattg
ctcaaagcctttggatcagttggcggtggtggttcgtcgtctagcgccatgaaatctgat
attcacccaccgccaggtgtaaactttagtggcgtttacggccatgacgactctatgggc
ggtgggaatcaccttcatgacctagtcgtcaatgcttacggtgcacaagaacaagatcat
catcaaaacgactatggagtaataggagggtacaacaacaaggtgaatagttatgagcag
ccaccacagaagaagcaaatgattaataacttttcaatggaaatgggaagtgaacaagct
aataggttgacaagggactttcttggtgttggagaaatagtaaggagcatgagtggtgga
ggatttagcagcagcagccaacagataagctcattggacaataattctgagagtagaaaa
actcaaagccatcgtcagccttttggaggcgctactggcaattatcagtga
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