Lycium barbarum (goji berry): 132625976
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Entry
132625976 CDS
T09483
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132625976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132625976
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132625976
mRNA degradation factors
5'-3' decay
Decapping complex
132625976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
132625976
NCBI-ProteinID:
XP_060196652
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All DBs
Position
2:5564410..5576282
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AA seq
282 aa
AA seq
DB search
MNCRNTDNLVEDLLGDFEFELQIPYLLYRNSSQEVNGIWFYNSRECEEAANLFNRILSAY
SKVPTKFKLPSNKSEFEELEAVPSMSVIDGPLEPSSTTSNTADVLDDRSFVNFVSNAMRI
GSGPNAAVQGQSYDSSAVVLPPPCPPAAVPPSSAPSPSVSTSSTLMPTLADVPEPDTKRS
SNLVKPSSFFGPPPTSSSLIPPVSSSVPTAPPLHPPGNLQRPYGAPLLQPFPPPNLPPSL
TSTPNNGPVINRDKVREALVMLVQDDQFIDMVYCAILKAHHT
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaactgcagaaatactgataatttggtggaggatctcttgggagattttgaattcgag
ctccagatcccatatttgttatatcgaaattcttcccaagaagtaaatgggatatggttt
tataactcacgtgaatgtgaagaagctgcaaatctctttaacaggatactgagtgcttat
tctaaggtgcctacaaagttcaaattaccatcaaacaagagtgaatttgaagagctggaa
gcagttccaagcatgtcggtaattgatggtcccctggagccatcatctactacatcaaat
actgcagatgtcctagatgatcgttcctttgtgaatttcgtcagtaatgctatgagaatt
gggagtggtcccaatgctgcagttcagggacagtcgtacgactcatctgcagtagtccta
cctcctccttgtcctcctgctgctgtacctccctcttcagcgccatctccttctgtttct
acatcttccactttgatgcctacccttgctgatgttcctgaaccagataccaaaaggtct
tcaaatctagtgaagccatcatcattctttggtcctcctcctacctcttcttcgctgata
ccacctgtttcttcatctgtgcctactgctcctccacttcatccccctgggaatctacaa
cgcccttatggagctcctttgcttcaaccgtttcctcctcccaatctgcccccatctctc
acttctaccccaaacaacggacctgttattaacagagataaagtgcgtgaggcacttgtg
atgcttgttcaagatgaccaattcattgacatggtatactgcgctattttgaaagctcat
catacatga
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