Lycium barbarum (goji berry): 132625977
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Entry
132625977 CDS
T09483
Name
(RefSeq) transcription factor IIIB 60 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132625977
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
132625977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
132625977
NCBI-ProteinID:
XP_060196654
LinkDB
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Position
2:complement(5641801..5656355)
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AA seq
626 aa
AA seq
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MVYCGFCAESTTRPDYVDGRICCPLCGRVLEEDNFSNEPTFVKNAAGQSQVEGKRVKTVQ
SVDSASRQRTINEAYYGIESIMNALGIGGGDSIANPAKAFYEIALERNFTKGRRKEQVQA
ACLYIACRESKKPFLLIDFSEHLRINVYVLGAVFLQLCKLLSLESQPFIQNPVDPSLFIH
RFTDRLFGGRKPNISRAALQIVASMKRDWMQTGRKPSGLCGAALYIAALSHGLSCSKSKI
IKVVHICEATLTKRLIEFENTESGSLTIEEFYKRAEDLEKEERLAPQFYSGSKGSGITEV
LCEHKGSVELPFAHGLCESCYSDFVKLSGGLDGGAEPPAFQRAERERLVAKEAAEDPKLS
MSNQVENNGAESEKEENTQSVTGSTNVQISGSEQIGAFSGVKTGHNVTCDTVHGTGCMGL
DDHDESGNFSDIDDAEIDGYFLDEEAKQCKKIIWEKMNPEYEEKAAKEAAELAANKAKES
SLANCSEDVQATRKIYAAANNNVAESRKEKRQKRAAELKNSLPPKTPAEAAKQMLTRKRL
CAKINYDALEKLFDDPEIPENLKKSRNVDDSTNYNVVKSSKIDSEVDETYEESFMQYDEG
MHYDEVMHYDEDGGGYGYDQYYDYDE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggtatattgcggtttttgtgcagagagtaccactcgacccgactatgtggatggcaga
atatgttgccccttatgtggaagagttcttgaagaagataatttttcaaatgagcccact
tttgttaagaatgctgctgggcagagccaagtggaaggaaagcgtgtgaagactgtccaa
agtgttgattcagcttcacggcaaagaacaataaatgaagcatattatggtatagagagt
ataatgaatgcattaggaattggcggtggcgattcgatagctaatccagctaaggccttc
tatgagatagcacttgagaggaatttcacgaaggggcgtaggaaagagcaagttcaggct
gcttgtctttacattgcatgtagggaaagcaaaaagccattcctactcattgacttctct
gagcacttgaggataaatgtgtatgttttaggtgctgtattcttacagctttgcaaactt
ctaagccttgaaagccaaccatttattcaaaaccctgtggatcctagccttttcattcat
cgattcactgatcgtttatttgggggaaggaagccaaatatttctagagctgcacttcag
attgtggccagcatgaagcgtgattggatgcagacagggagaaagccaagtggattatgt
ggagctgcactgtacatagctgctctttcacatggactgagttgttctaaatcaaaaatt
atcaaagtcgtacatatttgtgaagcaacattgaccaagcgtttgattgaatttgaaaac
acagaatctgggagtttaacgattgaggagttctataaaagagctgaggaccttgagaaa
gaagagagactggccccgcaattttattcggggtcaaaaggatctgggatcacagaagtg
ctatgtgaacacaaaggaagtgtggagctgccctttgcccatggtctttgtgagagttgt
tacagtgattttgtaaaactttcaggtgggcttgatggaggagctgaacctccagccttc
caacgtgctgagagggaaagattagtggcgaaagaagctgctgaggatccaaaactttcc
atgtccaatcaggtggaaaacaatggcgctgagtctgaaaaggaagagaacactcagagt
gtgaccgggagtacaaatgtgcagatatcagggtctgagcaaataggggcattctcagga
gttaaaactgggcataatgtgacttgtgatacagtacatggcacaggttgtatgggtctt
gatgatcatgatgaatcagggaacttttctgatattgatgatgcagagattgacggttat
tttctcgacgaggaggcgaagcaatgtaagaagatcatctgggaaaaaatgaacccggaa
tatgaggaaaaagcagctaaggaagcagctgaattagctgcaaacaaggctaaagagtcc
agtttagctaactgttcggaggatgttcaagctacacggaagatttatgctgctgctaat
aataatgttgcagaatcaagaaaggaaaaacgacagaaaagagctgcagaactgaaaaat
tctcttcctcctaaaacccctgccgaagcagcaaagcaaatgttaactagaaagaggcta
tgcgctaagatcaactatgatgcgctagaaaagctttttgatgatcctgaaattccagag
aacctaaagaagagtcgaaatgtggacgattcaacaaattataacgtggtaaagagcagc
aaaattgattcggaagtagacgagacttatgaagaatcatttatgcagtatgatgagggt
atgcattatgatgaggttatgcattacgatgaggatggtggaggatatggctatgatcaa
tactatgattatgatgaatag
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