Lycium barbarum (goji berry): 132626037
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Entry
132626037 CDS
T09483
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT3-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00270
Cysteine and methionine metabolism
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
132626037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbb03000
]
132626037
03032 DNA replication proteins [BR:
lbb03032
]
132626037
03036 Chromosome and associated proteins [BR:
lbb03036
]
132626037
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lbb02048
]
132626037
Enzymes [BR:
lbb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
132626037
Transcription factors [BR:
lbb03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
132626037
DNA replication proteins [BR:
lbb03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
132626037
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
132626037
Prokaryotic defense system [BR:
lbb02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
132626037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
132626037
NCBI-ProteinID:
XP_060196733
LinkDB
All DBs
Position
2:7396159..7411459
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AA seq
888 aa
AA seq
DB search
MPSKRKASSKSPDSLNKKNKRKAFSTPKTKLNQHVVVENTDPLFVNEATVTASRVECNDN
NIIVEKSDPVVVECVDDDEFIEEEVEESVCESSNDELLAQNKVRRAVQANEEQECAFSGE
AVTEAEAKQQYPHRYLNKDKVKSNGAAMSLNCQDDSDQLIQAKSHFTQALVDSQLYKLGD
DAYVKAADGEDDYICKVVEFFQAVDGTKYFTAQWFYRAKDTVIKALDQFIDNKRVFLSEV
KDDNPLDCLVKKIKIVPISSNVSLQLKESLRSESDYYYDMKYLLSYSSFISLPTDVSSPD
SESDSTISSDSDIAGVNERKQEKKLLDLYSGCGGMSTGLCLGADICDVKLVTKWAVDLNR
YACDSLKVNHPETEVRNEAASDFLLLLKEWEQLCASCSLLKSNTPPHPLLKVEDEEDDND
GGDEDEGSGDEEEGEIFEVQEILEVCYGDPKEIKKPGLYFKVRWKGYGADEDTWEPIEGL
VGCQKKIKEFVTKGFKTSVLPLPGEVDVVCGGPPCQGISGFNRFRDKQNPLQDPKNKQLE
VFMGIVEYLRPRFVLMENVVDLVRFAGGFLGRYALSRLVGMNYQARMGMMVAGVYGLPQF
RMRVFMWGALHSEKLPQYPLPTHNVVARGLTPTEFELNAVAYEEGMKVKLKKELFLEDAL
SDLPPVENNESRDEMPYTDEPKSDFQRFIRSRRDGTLGTALYDHRPLQLNEDDYQRVCQI
PKRKGANFRDLPGVRVRAVNIVEWDPNVERVKLTSGKPLVPDYAMTFVRGTSSKPFGRLW
WDEIVSTVVTRAQPHNQAVLHPLQDRVLTIRENARLQGFPDYYKLTGPIKERYIQVGNAV
AVPVARALGYSLALALKGLSVEEPLLSLPANFPCLEELISNEESLDKL
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcaaacggaaagcttcatccaagtcaccggattcattaaataagaagaacaaa
cgtaaagctttttctactccaaaaacgaagttaaatcaacatgtagtagtcgaaaatacg
gatccattatttgttaatgaagctacggtgactgcttcgcgtgttgagtgtaatgataat
aatatcatagtggaaaagtcggatccagttgttgttgagtgtgttgatgatgatgaattt
atagaagaagaagttgaggaatcagtatgtgagagctcgaatgatgaattgttggctcag
aataaggtgagaagagctgtgcaggcgaatgaggagcaggaatgtgcgttttctggtgaa
gctgtaacggaggcggaagcgaagcagcaatatcctcatcgctaccttaacaaggataag
gtgaaatcaaatggtgcagctatgagcttaaattgtcaagacgattccgaccaattaatc
caggctaagagccattttacccaggcattggttgacagtcagctttataaactcggggat
gatgcgtatgtaaaggctgcagatggtgaagatgattacatatgcaaggttgttgaattt
tttcaagctgttgatggtacgaagtattttactgctcaatggttttacagagccaaggat
actgtaattaaagctcttgaccaatttatcgacaacaagcgtgtattcctatcagaagtt
aaggatgacaaccctcttgattgccttgtaaagaaaatcaagattgttcctatatcctca
aatgtaagcttacagttgaaggaaagtttgagatcagaatctgactattactatgacatg
aagtacctgctttcatactcatcatttattagcttaccaacagatgtttcaagtcctgat
agtgaatcggattctaccatatcaagcgacagtgatattgcaggggttaatgaacggaag
caagaaaagaagctcctggatctctattcaggttgtggaggaatgtccactgggctgtgc
ttgggtgctgacatttgcgatgttaaacttgtcacgaagtgggctgttgacctaaatcga
tatgcttgtgatagcttgaaagtgaaccacccggagacagaggtgaggaatgaggctgcc
tcagatttcttattgcttttgaaagagtgggagcagctttgtgcatcctgctccttgttg
aaaagcaataccccaccacacccgttgctgaaagttgaggatgaggaggacgacaatgat
ggtggagatgaggatgagggatctggtgatgaggaagaaggtgaaatttttgaggtgcaa
gagattttagaagtttgctatggagacccaaaggaaataaagaagcctggcctttacttt
aaggtacgttggaagggttatggcgcagatgaagacacatgggagccaatagagggctta
gttggttgccaaaagaaaataaaggaatttgtgaccaagggtttcaagacaagtgttttg
ccattgccgggggaagtagacgtcgtatgtggaggccctccttgccagggcataagtggg
tttaatcgttttagggacaagcagaatccattacaagatccgaaaaataaacagcttgaa
gtattcatgggcattgtggagtacttgagaccaaggtttgtgttaatggaaaatgtggtg
gacttggtcaggtttgcaggaggtttcctcggacggtatgcattgagcagacttgtggga
atgaactaccaagcacggatgggaatgatggtagctggggtgtatggacttccacaattt
cgtatgcgtgtcttcatgtggggtgctcttcattcggagaaattaccacaatatccgttg
cccacacataatgttgttgcgaggggtctcactcccacagaatttgagttaaatgcagta
gcatatgaagagggcatgaaggtcaagctaaagaaagaactttttcttgaggatgcactt
tcagatcttcctcctgtggaaaataacgagtcaagggatgaaatgccatatactgatgaa
cccaaatctgacttccagcgtttcattagatcaaggagggatggtacattgggtactgct
ttgtatgatcatcggcctctacagttaaatgaagatgattatcagcgtgtatgtcaaatt
cccaagcgaaagggtgcgaacttcagggacttgcctggggttcgtgttcgtgctgttaat
attgttgaatgggatccgaatgtggaaagagtaaaacttacttcgggaaagcctttggtc
ccggactacgcgatgacctttgttcgtggtacttcatcaaagccatttggtcgtttatgg
tgggacgaaattgtttcaactgttgttacaagagcacagccccacaatcaggccgtatta
catccattgcaggacagagtgcttactatccgtgaaaatgcacggctgcaaggttttcct
gattactacaaattgacaggaccaataaaagaaaggtacatacaagtaggaaatgcagtt
gcagtgccagtggcccgggctttagggtattctttagcattggcattgaaaggattatct
gtagaggaaccgttactgtcattgccagctaattttccatgtctagaagaactgatatcc
aatgaggagtctttagataaactgtaa
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