Lycium barbarum (goji berry): 132626044
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Entry
132626044 CDS
T09483
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 2 isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132626044
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132626044
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
132626044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
DUF4763
zf-RING_UBOX
RING_XB3-XBAT31
zf-RING_6
CC_Liprin_beta
zf-tcix
TRAF3_RING
Prok-RING_4
AmiA-like
zf-rbx1
Endotoxin_N
Motif
Other DBs
NCBI-GeneID:
132626044
NCBI-ProteinID:
XP_060196746
LinkDB
All DBs
Position
2:7891408..7905891
Genome browser
AA seq
882 aa
AA seq
DB search
MENSATSDEPQKKRPHINSVFSSPTMARHSKTSNDNKAVDAAILQYQNQKLVQQLDAQKH
KLHDLEAKMKELRDKQASYDDFLVTLNRIWNQLDDDLIILGARSGADQMALQSMDQQDYS
RGSIPSCPAEEIFLCRVLKTNAVPGNENAGSSVNIREALDLRHASTLELMKSLEKAIDAQ
RIKTENFAHLLEGKSSAEDAIILLGKIDDMMKEEANYLHGVIDALHLKHKEYADAIEACN
QRQSLDRSELKRLEGELEESMMALEDSRRKLVTLKMQKDVVSGGQETVPNAVNGSMSPEK
HTDRTKGVRELKESIEEAKILKEDRLSELQDAQEDNLHLLKQLQDLQNELKEDRYVSSSR
AYTLRNDQLHHWNAEAERYKALTETLQADRSFIGRREKELVVKAEAVDAAKKAVDNSESR
IEELEHCIHRFIIEKNELEIKMEEAIQDSGRKDIKKEFQIMGSALSKEIGMMEAQLNRWK
ETAQEAVSLREERRSLQDSLGRKAIEHKGLIGKVAHQTGEIRTLKELTEKMQRDKQERQI
FLDMLGQQIYDNRDISEIRESEKRAHAQAEILRAALNEHHLELRVKSANETEAACQQRLS
TAEAEIAQLRAELDAEDRGVLELREAIKIKEGESETYISEIETIGQAYEDMQTQNQHLLQ
MLAERDDYNIKLVSESVKIKQEQSLLLSRKQVLTSQLQQSNTYLESLKTRIAQSEDQMKV
QITEALSYTQQDRHVALTLETVKRELGDADKELKWLRSAASSADKEYEQLMRKLDEIQME
RETERSEKKKLDEELEELNKTVDELTSASSEAAVQKLQDEINDSKAILKCGVCLDRPKEV
VITKCYHLFCNPCIQRNLEIRHRKCPACGTAFGQNDVRFVKI
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggagaactctgctacatctgatgagcctcaaaaaaagagacctcatatcaattctgta
ttttcatcaccaaccatggctagacattctaaaacttctaatgataataaagctgttgat
gctgcaattctccagtatcaaaatcaaaaactagtacaacagttagacgcgcagaaacat
aagttgcatgatcttgaagccaaaatgaaagaattaagggacaaacaagcttcttatgat
gacttcttggttacattaaatcggatctggaatcagctagatgatgatctgattatcctt
ggggcacgcagtggtgcagatcaaatggctttgcaaagcatggatcaacaagattattct
cgaggttcaattccatcatgtcctgcggaggagatattcctgtgtagggtgttgaaaacc
aatgccgttccgggcaatgagaatgccggatcctctgtgaatatcagagaagctcttgat
ctgcgtcacgcttctactcttgaattgatgaaatcgttggagaaagctattgatgctcag
cgaattaaaaccgaaaattttgctcatcttttggaaggaaagtcatccgcagaagatgca
atcattcttctcggtaagattgatgatatgatgaaagaagaggctaattatctccatgga
gtgattgatgctctgcatttgaaacacaaagaatatgctgatgcaattgaagcttgtaat
caaaggcagtcattggatcgatctgagttaaaacgtcttgaaggtgagctggaggaaagc
atgatggcacttgaagatagtagaaggaagctagttactttgaaaatgcagaaagatgtg
gtgtctggggggcaggaaacagttccaaatgcagtgaatggaagtatgtcacctgagaag
catacagaccgaacgaaaggtgtgcgggaactgaaggagtctatagaagaggcaaagata
ctgaaagaggaccgcctctctgagcttcaagatgcccaggaagataatctacatttgtta
aagcagttgcaggatcttcagaatgaactaaaggaagacagatatgtgtcttcatctcgt
gcttataccttacgcaatgatcaacttcaccattggaatgctgaggcagaacgatacaaa
gctctgaccgagactcttcaggctgacaggtctttcatcggacgaagggagaaagaactg
gttgtgaaagcagaggctgtggatgcagcaaagaaagcagttgataactccgagtcaagg
attgaggaattggagcattgcattcacagattcataattgaaaaaaatgagctggaaatc
aaaatggaagaagccattcaagattcaggaaggaaagacatcaaaaaggagtttcagata
atgggctctgctttatcaaaagaaataggaatgatggaagctcagctgaatcgttggaag
gagactgctcaagaagctgtttccttacgtgaagaaagacggtcattgcaagattctttg
ggaagaaaggctattgagcataaaggcttgatcggtaaagttgctcaccagactggggag
atccgaacactaaaggaacttactgagaagatgcagagggacaaacaggaacgtcaaatc
ttcttggacatgcttggccagcaaatttatgataacagagacatatcggaaattagagag
tcggagaaaagagcgcacgcgcaagctgaaattttgagagctgctttgaatgaacatcat
ctggaattgagggtgaaatctgctaatgaaactgaggctgcttgtcagcagaggctttcc
actgctgaggcagaaattgcacaactacgggcagaactggatgcagaagacaggggtgtt
ttagagctaagagaggcgataaaaataaaagaaggggagtctgaaacctatatatctgag
attgagacaattggtcaagcctatgaagacatgcagacgcagaatcaacatcttctgcag
atgctggcagagagggacgattataatataaagttagtttctgagagcgtgaagataaag
caggaacaaagcttacttctctctcggaagcaagtattaacgtcacaacttcaacagtct
aatacatatcttgaatctctgaagacgaggatagctcaaagtgaagaccagatgaaagtt
caaattacagaagctttaagttatacccaacaagatagacacgtggcattgaccctggaa
acagtaaagcgggaattgggggatgctgataaggaattgaagtggctgagatctgctgct
tcctccgctgataaggaatacgaacagctcatgagaaagctggatgaaattcagatggaa
cgtgaaactgaaaggagtgagaaaaagaagcttgatgaagagctagaggagttgaataaa
actgttgatgagttgacttctgcaagtagcgaggctgctgtacaaaaactgcaggatgaa
ataaatgattccaaggctattctcaagtgtggagtgtgtcttgatcggccaaaagaggtc
gtaatcacaaaatgttatcatctgttctgcaatccatgcatccagagaaatttagagatc
cggcatcgcaagtgtcctgcttgtggaactgcttttgggcaaaacgatgttcgtttcgtg
aaaatctga
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