Lycium barbarum (goji berry): 132626119
Help
Entry
132626119 CDS
T09483
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132626119
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132626119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
132626119
NCBI-ProteinID:
XP_060196851
LinkDB
All DBs
Position
2:complement(9993523..9999432)
Genome browser
AA seq
439 aa
AA seq
DB search
MAFISGNIVLLILLICLASLIPNLHAGIAEFDEYLEKQAKEALNSSLAAYNQNPEEVTDT
FNKEVGDSLLNYTGLRRHLKEKSSCMATNPIDRCFRCDKNWAENRKKLADCARGFGHKTT
GGKAGRYYVVTDDSDDDVKDPKPGTLRHAVIQEEPLWIIFEKSMVIKLKQELMITSDKTI
DGRGVSVHIANGAGLTIQFVHNVIIHNIRIHHIISTSGGMIRDSVKHIGIRTVSDGDGIS
IFGSNHIWIDHCTLSQCTDGLVDAIMASTAITISNCKFNHHNDVILLGATDAFPQDSIMQ
VTVAFNRFGHGLIQRMPRCRWGFFHVVNNDYSHWEMYAIGGSANPTIISQGNRFKAANNP
NTKQVTKRDYAPESVWKNWQWVSEGDSFLNGAYFVESGPQTKKKAALTKPHRIKFKPGSY
AGRLTRYAGARKCKIGTPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcctttataagtgggaatatagttttgttaatattgctcatatgcttagcttcatta
atcccaaatttgcatgccggaattgctgaatttgatgaatatttggaaaagcaagctaag
gaagccctcaattcttcccttgctgcatacaatcaaaatcccgaggaagttactgataca
ttcaataaagaagttggagattcattgctaaattatacaggcttaaggaggcatcttaaa
gaaaaaagtagttgcatggcaaccaatccaattgacagatgctttaggtgtgacaaaaac
tgggctgaaaacaggaagaagctggcagattgtgctcgaggatttggccacaaaacgacc
ggtggcaaagctggaaggtactatgttgtcaccgatgactcggatgatgacgtgaaggat
ccaaaaccggggacccttcgtcatgctgtgatccaagaggagccattgtggatcattttt
gagaaatcaatggtaattaagttgaagcaagaattgatgatcacgagtgacaagacgatc
gatggcagaggagtctctgttcacattgccaatggcgctggcctaacgatccaatttgtg
cataatgtcataatccacaacattaggatccaccatatcatatctacctctggtggcatg
attagggactctgttaaacatattggtattaggacggtgagcgatggcgatggcatttcc
atttttggttccaatcatatctggattgaccattgcactttgtcacaatgtactgatgga
ctcgtcgatgccattatggcttccactgcaattaccatttctaactgcaaattcaatcat
cataacgacgtgatacttttaggggcaactgatgcctttcctcaagattcaataatgcaa
gtcacagttgcattcaatcggttcgggcatggattgattcagaggatgccaaggtgcagg
tggggattcttccatgttgtcaacaatgactactctcattgggaaatgtacgcgattggt
ggcagcgcaaatcccactattatcagccagggtaatcgtttcaaggctgccaataatcct
aatactaagcaggtgactaagagggattacgcaccagaatccgtgtggaagaactggcaa
tgggtatcggagggcgattctttcttaaatggagcttactttgtggagtcagggccacaa
accaagaaaaaagctgcattgacaaaacctcataggatcaagttcaagcctggttcatat
gcaggccgacttacgcgctatgctggtgcgcgcaaatgcaaaatcggcacaccttgttaa
DBGET
integrated database retrieval system
