Lycium barbarum (goji berry): 132626438
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Entry
132626438 CDS
T09483
Name
(RefSeq) DNA topoisomerase 6 subunit B isoform X1
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbb03032
]
132626438
Enzymes [BR:
lbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
132626438
DNA replication proteins [BR:
lbb03032
]
Prokaryotic type
DNA Topoisomerases
132626438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
132626438
NCBI-ProteinID:
XP_060197287
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All DBs
Position
2:42007743..42029260
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AA seq
671 aa
AA seq
DB search
MESRESSESPEVPKKGKSKTPRKPKDSVLKQKSPAEFFADNKNIAGFDNPGKCLYTTVRE
LVENALDSSESISELPVVQITIEEIGRSKFNSMIGLADHERRDEALYDDFETAKAREKRL
AKEARHLEIQAKNAALGKKVKDSAATKAAKGREASYYRVTCKDNGRGMPHDDIPNMFGRV
LSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEITSSMKSQNYTTFCRLDIDIHKNIP
HIHVHEKRENKERWHGAEIQIVIEGNWTTYRSKILHYMRQMAVITPYAQFLFQFLSESPE
KNVIIRFARRTDIMPPVPLETKYHPSAVDILLIRRLITETSKQTLLQFLQHEFVNIGKSH
ADRLIGEMGPDFSPKMSVKSLTPQQIVRIHQLFRQAKFDDPSGDILSPAGEYNLRLGIIK
ELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKDVKQGLNVFRFANRIPLLFEQGADVVT
RTAMKRINWNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIASAVKTAIQQC
CNQLKSKIVKRIHAREQQERKRNLSKYIPSATAAIYDLLKQTNAHGSKKRRYTDDNADLL
EQVSVNSVTKNTFKEKLAQHVEKVDYEMGLEYATQTGVNEEPREDIYIESLDEDKNFIDF
KNPIFVFRLYN
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagagtagagaaagcagtgagagtccggaagtgccgaagaagggcaaatcaaaaacc
cctcgaaaacccaaagatagcgttctcaaacagaagtcgccagctgagttctttgcagat
aacaagaacattgctggttttgacaatcctgggaaatgtctttacactactgtgagagaa
ctagttgagaatgcacttgattcttctgaatccatctctgaacttccagtcgtacagata
accattgaagagattggcagaagtaagtttaattcgatgattggtctggctgaccatgaa
cgaagagatgaagccctatatgatgattttgagacagcaaaggctcgtgagaaaagactt
gccaaggaagctcggcatctagagattcaagcaaagaatgcagctcttgggaagaaagta
aaagactctgcagctacaaaggcagctaagggtagggaggcatcgtattatagggtgaca
tgcaaggataatggaagaggaatgccacatgatgatatcccgaatatgtttggacgagtt
ctgtctggaacaaagtatggattgaaacagacacgtgggaaatttggtcttggtgcaaag
atggcattgatttggtccaagatgagtacaggacttcccattgaaattacatcttccatg
aagagccaaaattataccacattctgtaggctggatattgatattcacaagaatattcct
cacattcatgtacatgaaaaacgggaaaacaaagaacggtggcatggtgctgaaatccag
attgttattgaagggaactggacaacataccgatccaaaatattgcattatatgcgacaa
atggctgtcatcacaccctatgcccaatttcttttccaattcttatcagaatctcctgag
aaaaatgtgataataaggttcgccagaagaacagacataatgcctccagttcctcttgag
accaagtaccatccatccgctgtggatatacttcttatcagacggcttataacggaaaca
tcaaaacagactcttttgcagttccttcagcatgaatttgtaaacattgggaagtctcat
gcagatcgtttaattggggagatgggtccagattttagcccaaaaatgtcagttaaatct
ctaacaccacagcaaatagttcgcatccatcagttgtttcgtcaagccaaatttgatgat
cccagtggtgacattttaagtcctgctggagaatacaatctacgtcttggcattataaag
gagttgcacccagatatggttgcgacctattctggaagtgctcaagtattcgaaggtcat
ccattcatcgtggaagctggagttagtgttggtgggaaggatgttaaacaagggctgaat
gttttccgatttgctaatcggattccacttctttttgagcaaggtgctgatgtcgttacc
aggactgctatgaagagaatcaattggaacagttacaaaatcaaccaaacacaagacaag
attggtgtctttgtgagcattgttagcaccaaaatccccttcaaagggaccggcaaggag
tatattggagatgacataagtgagatagcttctgctgtcaagacagccattcagcaatgc
tgcaatcaactcaaatcaaaaattgtaaaaaggattcatgctcgtgagcagcaggaaagg
aagcggaatttgagcaagtatattcctagtgctaccgctgctatatacgatcttctaaaa
cagacaaatgcgcatggatcaaaaaagagacgctacacggatgataatgcagacctacta
gaacaagtttcagttaattcagtaacaaaaaatacattcaaagaaaagcttgctcagcat
gttgaaaaggtggactacgaaatgggtttggaatatgccacacagaccggagtgaatgaa
gaacctcgggaagacatatacatagagtcactggatgaagataagaacttcatcgacttc
aagaaccccatatttgtcttcagactctataactag
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