Lycium barbarum (goji berry): 132626486
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Entry
132626486 CDS
T09483
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132626486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132626486
03110 Chaperones and folding catalysts [BR:
lbb03110
]
132626486
03029 Mitochondrial biogenesis [BR:
lbb03029
]
132626486
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbb04147
]
132626486
Enzymes [BR:
lbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
132626486
Messenger RNA biogenesis [BR:
lbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
132626486
Chaperones and folding catalysts [BR:
lbb03110
]
Heat shock proteins
HSP60 / Chaperonin
132626486
Mitochondrial biogenesis [BR:
lbb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
132626486
Exosome [BR:
lbb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132626486
Exosomal proteins of other body fluids (saliva and urine)
132626486
Exosomal proteins of breast cancer cells
132626486
Exosomal proteins of colorectal cancer cells
132626486
Exosomal proteins of bladder cancer cells
132626486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
132626486
NCBI-ProteinID:
XP_060197377
LinkDB
All DBs
Position
2:complement(49640545..49646861)
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AA seq
599 aa
AA seq
DB search
MASTFAGMSSAGPLAAPSTSSNKLSSVANISSTSFGSKRNVVLRKNRSPKISAAAKELYF
NKDGSAIKKLQIGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAREVELEDAV
ENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTAKA
LVAELKKMSKEVEDNELADVAAVSAGNNYEVGSMIAEAMSKVGRKGVVTLEEGKSAENSL
RVVEGMQFDRGYISPYFVTDSEKMTVEYENCKLLLVDKKITNARDLVNVLEDAIRNGYPI
LIIAEDIEQEALATLVVNKLRGALKVAALKAPGFGERKSQYLDDIATLTGGTVIREELGL
TLDKADKEVLGLAAKVVLSKDSTTIVGDGSTQEAVNKRVAQIKNLIEAADQDYEKEKLQE
RIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVD
AIKETLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNVKFGYNAATGQ
YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAVAGSPMDNSGYGY
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcatctacttttgctggtatgtcctcagcaggacccttggctgctcccagcacttct
tcaaacaagctttcgtctgttgctaatatatcttccacctctttcgggagcaaaagaaat
gttgtactaagaaagaaccgcagtccgaaaatttcggctgcagcgaaggagttgtacttc
aacaaggatgggtcagctatcaagaagctgcagattggtgtgaacaaacttgctgatcta
gttggagttactcttggcccaaaaggaagaaatgttgtcctcgagagcaagtatggtgct
ccaaaaatcgttaatgatggagttaccgtcgccagagaggttgaattagaggatgcagta
gaaaacatcggtgcgaaactagtgagacaagctgctgccaaaaccaatgacctggctggg
gatgggactacaacatctgttgtgctagcccagggccttattgctgaaggtgtcaaggtg
gttgcagctggtgcaaaccctgtcctgatcaccagaggaattgagaagactgcaaaagca
ttagtagctgagttgaagaaaatgtccaaagaggtggaagacaatgaactagcagacgtg
gctgcagtaagtgctgggaacaactatgaagtagggagtatgattgctgaagccatgagc
aaggttggaagaaaaggtgttgtgacactagaagagggaaaaagtgctgaaaacagtctc
cgtgtggttgaaggaatgcaattcgaccgtggttacatctctccttactttgttactgat
agtgagaaaatgaccgttgaatatgagaactgtaagttactactggttgataaaaagata
acaaatgcaagagatcttgttaatgtcctggaagatgctatcagaaatggttacccaatt
ttaattattgctgaagatattgagcaagaagctctggcaacacttgttgtcaataagctt
agaggtgccttaaaggttgccgcacttaaagctcctggttttggtgagcgaaaaagccaa
tatcttgatgacatagcaacccttaccggaggcactgtgattagggaggaactaggcctc
accttagacaaggctgacaaggaagttctaggccttgctgctaaagtggtgctatctaag
gattccactacaattgttggtgatggtagcactcaggaagcagtcaataagcgtgttgca
cagattaaaaacctgatagaggctgcagatcaagattatgaaaaggaaaaacttcaagaa
agaattgctaaattatcaggaggtgtggctgtcatacaggtcggagcacaaactgaaact
gagttgaaagagaagaaacttagagtggaagatgctctcaatgcaacaaaggcagctgtt
gaggaaggtattgttgttggaggaggctgcacactcctcagactggctgccaaagttgat
gccatcaaggagacccttgcaaatgatgaggagaaggttggagctgatattgtcaaaaga
gcattgagctacccattgaaattgattgctaaaaatgctggtgttaatggaagcgttgtc
agtgagaaggtgctctcaagtgacaatgtaaaatttggatacaatgctgcaactggccaa
tatgaagacttaatggctgctggcatcattgatccaacaaaggtggtgagatgttgtcta
gagcacgccgcatctgtggcaaagacattcttgatgtccgattgtgtggttgttgaaatc
aaggagcctgaaccagcagttgctggcagcccaatggacaactcaggatacggatactag
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