Lycium barbarum (goji berry): 132626648
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Entry
132626648 CDS
T09483
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132626648
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lbb01002
]
132626648
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132626648
04121 Ubiquitin system [BR:
lbb04121
]
132626648
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132626648
Peptidases and inhibitors [BR:
lbb01002
]
Metallo peptidases
Family M67
132626648
Membrane trafficking [BR:
lbb04131
]
Endosome - Lysosome transport
Others
Others
132626648
Ubiquitin system [BR:
lbb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
132626648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
DUF1908
Motif
Other DBs
NCBI-GeneID:
132626648
NCBI-ProteinID:
XP_060197576
LinkDB
All DBs
Position
2:95254245..95266377
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AA seq
509 aa
AA seq
DB search
MNVDAMTRKVEVDNRIPLRNYYRIANNLLRQANIHRGEKNIIDLYIILLRYSSLVTETIP
SHRDYQALHPKERALSKKMLLTVLDELEGLKPEFQCQFHGIGKETQVTAQPYQLNNQENH
RYRPVGNSLGWPSTSNKASSDYDNQWAITNAPSSTWKQNKEYSRTSSPSSIDMQFQKLSF
NFTVPKQETLSRHSFLGPNGLRGQWSGPSSEIKVNYPANDYLASNEILSLNQAEDRPLVS
NNTSLKVEKSTMDSVLSLDDGRWLHPTEDSNFQFLDDVPSDSIPSNLRQPSPPPVLAQLQ
QEFRPISPSKVADPRPGPANSIQDGPSSSNSYQHLHVPVRLMEDFLRLARENTAKNLETC
GVLAGSLKNRVFHITTLIVPKQESTSDSCQTLNEEEIFDIQDKQSLFPLGWIHTHPSQTC
FMSSVDLHTHYSYQIMLPEAIAIVMAPTDTASPHGIFHLSDPAGVSVIRNCQQRGFHPHE
EPEDGSPIYEHCSHVYMNANMKFDIVDLR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggacgcgatgacacggaaagtggaggtggacaatcggattccccttcgcaat
tactacaggatcgccaataatctcctccgtcaggccaatattcaccgtggagagaagaat
atcatagatttgtatataatacttctgagatattcaagtttggttactgaaacgataccc
tcccatcgagattaccaggctttgcatcctaaagaaagagcattatcgaaaaagatgctg
ttaacagtgctagatgaactagagggtttaaaacctgaattccagtgtcagtttcatgga
attggtaaagaaactcaagtaacagctcagccttaccaactcaataatcaggagaaccat
cgctatagaccggttggcaattctttaggatggccttctaccagcaataaagcatcttca
gattatgataatcaatgggccataactaatgcaccttcatctacatggaagcagaataag
gaatactctcgtacttcatccccaagttcgatcgatatgcagttccagaagctatctttc
aattttaccgttccaaagcaagaaacattatcaaggcactcgtttttaggcccaaatgga
cttcgtggacagtggtcaggacctagttctgagataaaggttaattaccctgcaaatgat
tatctagcttcaaatgagattttgagcctcaatcaggctgaagatcggcctttggtgtct
aacaacactagcttgaaggtggaaaagtctactatggattcggttctttctttggatgat
gggcgatggttacaccctactgaggattctaattttcaatttcttgatgatgtgccgagt
gatagtattccaagtaacttaaggcaaccttcaccccctccagttttggcacaactacaa
caagagtttcgtcctatatctccatccaaagttgcagatccaagacctgggccagctaat
tccattcaagatggaccatccagttcaaattcttatcaacatttgcatgttccagtgaga
ctgatggaagatttcttgagattagctcgagaaaatacagcaaagaatttagaaacttgt
ggagttcttgctggttcactgaaaaaccgtgtttttcacatcactactcttatagtccca
aagcaggagtcaacttcagattcatgccagacattaaatgaagaagagatttttgacatc
caagacaagcagtctctctttcctcttggttggatacatacacatccgtcacaaacatgt
tttatgtcatcagttgatctgcacactcattattcttatcagattatgttgccagaagca
attgcaattgtgatggctcctacagacacagccagccctcatggcatcttccacttgtct
gatcctgctggtgtgtctgttattcggaattgtcaacaacgtggttttcatccacacgag
gagcccgaggatggaagtccaatatatgaacactgttctcatgtctatatgaatgcaaac
atgaagtttgatattgtagaccttcgctaa
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