Lycium barbarum (goji berry): 132626692
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Entry
132626692 CDS
T09483
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132626692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132626692
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132626692
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
HECT type E3
132626692
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Ap4A_phos_N
Motif
Other DBs
NCBI-GeneID:
132626692
NCBI-ProteinID:
XP_060197620
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All DBs
Position
2:99356193..99414647
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AA seq
1055 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSSKERDRQKLLEQTRLERNKRNLLRQQNSAAIKIQKCFRGRK
EVEAERSKVRENFLKTYGKRCHPVDRQCFGPDSDFLRQLLFFFNPTYTTDVSVLVETCRS
LLEFVRDSGDIVSLFAGTEYASNPALVRCRVKKYVHACIRAVYGNRNKLRDQLFMESEKS
CTSAILLLDAVTLLIDLRLPWACSTVTYLLQSNIYSLFREIVLIGKERSFPASNRVVSSF
EHVLALITSHIGQSTCTCPSVDPKCCFPSQILTIPFLWRFFPHLKEVFASPSVSRHYFHQ
MTLCMKDHINVLPPDIAIDLPGYAILLGNLLEVVGPAFAQPESFTMAVDFATVATFLLKA
LPSLQSSNMGSKEMSEDDMVIDDEQTEKVLNLGLEQQITNAIDARFLLQLTTVLLGGFSP
LNGSHSGQFDEKHVAAVSAVCAFLHATFNILPLERIMTVLAYRTELVPVLWNFMKQCHEN
QKWSSLSEQSPYLPADAPGWLLPLSVFCPVYKHMLMIVDNEEFYEQEKPLSLKDIRCLIV
ILRQETTVVIVRGSTAVIGLASVHIRSVSALWQLLWSNPTVPTNFGKSPTDIFAMKKHPL
EFLQHRVCVVASELLSQLQDWNNRRQFTPPSEFHADGVNEYFISQAMMENTRANDILKQA
PFLVPFTSRAKIFTSQLAAARERNGSSGLFARHRFRIRRDQILEDAFNQLNALSEEDLRG
LIRVTFVNELGVEEAGIDGGGIFKDFMENITRAAFDVQYGLFKETADHLLYPNPGSGLIH
DQHLQYFHFLGTILAKAMFEGILVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFL
KHYEGDVSDLELYFVIVNNEYGEQTEEELLPRGKSIRVTNENVITFIHLVANHRLNFQIR
QQSSHFLRGFQQLIQREWIDMFNEHELQLLISGSLDGIDIDDLRAHTNYTGGYHKEHYVI
DMFWEVVKSSSLENQRKFLKFVTGCSRGPLLGFKYLEPLFCIQRAGGNASDEALDRLPTS
ATCMNLLKFPPYRSKEQMEQKLLYAINADAGFDLS
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctcgggtgatccttcgacgaggaagcgagtcgatttgggtggacgcagctct
aaagaacgtgaccgacagaagcttctagaacagactcgtttagagcgcaacaaacgcaac
ctcttgcgtcagcaaaactcagccgctatcaaaattcagaaatgcttcagaggtagaaag
gaggtggaagctgaacgttctaaagttcgtgagaattttttaaaaacatatgggaagcgc
tgccaccctgttgacaggcagtgtttcggtccagattcagattttctgcgtcagctactt
ttttttttcaatccaacatacactactgatgtttctgtccttgtggagacatgccgatcg
ctactagagtttgttcgagatagcggggatattgttagcctctttgctggtacggagtac
gcttccaatcctgccttggtgagatgcagagtaaagaaatatgttcatgcttgtattcgg
gctgtttatgggaacaggaataagttgagagatcaactttttatggaatctgagaagtcc
tgtacatcagcaatactcttgttggatgcagttacattgttgattgatttaagacttcct
tgggcttgcagcactgtcacctatcttcttcaaagtaatatatattccttatttagggaa
attgttctgattggcaaggaaagaagctttccagcttccaacagggttgtatcttcattc
gagcatgtgcttgcactaattacatctcatattggtcaaagcacttgtacttgcccaagt
gttgacccaaagtgttgcttcccatcccagattcttacaattccatttttatggcggttt
ttccctcacctaaaagaggtctttgcaagtccatcagtgagtcgtcattattttcatcag
atgacattatgcatgaaagaccatattaatgtcctccctcctgatatagcgatcgatcta
cctggatacgctatccttcttgggaatctgttggaagttgttggacctgcttttgctcag
ccagaatcattcactatggcggttgattttgcaacagttgcgacttttttgttgaaagca
ctcccttctctccaatcatcaaatatgggaagtaaagaaatgtctgaggatgacatggtc
attgatgatgaacaaacagaaaaagttctgaatttgggtttggagcaacagataaccaat
gctatcgatgcacgttttcttctacagctgactactgttttactgggagggttttcacct
ctaaatggttcacatagtggccagtttgatgagaaacatgtggcagctgttagtgcagtt
tgtgctttccttcatgcgactttcaacattttgccgcttgaacgtattatgactgtacta
gcctatcggacagaactagttcctgtcctttggaacttcatgaaacaatgtcatgaaaat
cagaaatggtcatccttgtcagagcaatcaccatatttgccagcagatgctcctggatgg
ctattacctttatctgttttctgcccagtttataagcatatgcttatgattgtcgataat
gaggagttctatgaacaggagaagccattatcgctgaaggatatcagatgtttgattgtt
atccttagacaggaaactactgtggtgattgttagaggaagcactgcagtgataggatta
gcttctgttcacatcaggtcggtcagtgccttgtggcagctcctctggtcgaatcctacg
gtgcctactaactttggtaaatcaccaactgatatctttgctatgaagaagcatccatta
gagttccttcagcatagggtttgtgttgtagcgtctgaactcctatcacagttacaagat
tggaacaacagacggcaatttacacctcctagtgagtttcatgctgatggtgtaaatgag
tatttcatatctcaggcaatgatggagaatactagagccaatgatatactaaaacaagct
ccattcctggtgccatttactagccgagctaaaatatttacttcacagctagctgcagca
agagaaaggaatgggagctctggtctttttgctaggcatagattcagaattagaagagac
caaattctggaagatgcttttaaccaattgaatgcattgtcggaggaggatctccgtgga
ttgatacgtgtgacttttgtcaacgagcttggagttgaggaagctggtatagatggtggt
gggatattcaaggatttcatggagaacattactcgagcagcttttgatgtacaatatgga
ttatttaaggaaactgcggatcacctactctatccaaatcctggatctgggttgattcat
gatcaacacctccagtattttcattttctggggacaattcttgctaaggcaatgtttgaa
ggcatcctcgttgatattccatttgcgacattctttttgagcaagttgaagcaaaagtat
aactatttgaatgatcttccttccttggatccagaattatatcgccatctcatcttcctg
aagcattacgaaggtgatgtttcggatcttgagttgtactttgtcattgtcaataatgaa
tatggggagcaaactgaagaagagctgcttcctcgtgggaaaagcatacgtgtgactaat
gagaatgtcatcacctttattcatcttgttgccaaccatcgtttaaactttcagatccgt
caacaaagttctcattttctgaggggcttccaacagctaatacaaagggagtggattgac
atgtttaatgaacatgaacttcagcttcttatttctggatcacttgatggcattgacatt
gatgaccttcgagctcataccaattatacaggaggttaccataaggaacactatgttatc
gatatgttttgggaggttgtgaaaagctcttctttggaaaatcagagaaaatttctgaag
tttgtgactgggtgttcacgaggacccttgctcggatttaaatatttggagcctttgttc
tgcatacagagagcgggtgggaatgcttctgatgaagctcttgatcgtctgccgacatca
gctacttgcatgaatcttttaaaatttccgccatacagaagcaaagagcagatggagcag
aaattgttatacgccataaatgctgatgctggttttgatttaagctga
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integrated database retrieval system
