Lycium barbarum (goji berry): 132626871
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Entry
132626871 CDS
T09483
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00730
Thiamine metabolism
lbb00900
Terpenoid backbone biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
Module
lbb_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
132626871
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
132626871
Enzymes [BR:
lbb01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
132626871
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
Transketolase_N
Transketolase_C_1
Motif
Other DBs
NCBI-GeneID:
132626871
NCBI-ProteinID:
XP_060197873
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All DBs
Position
2:complement(116512942..116517417)
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AA seq
717 aa
AA seq
DB search
MALCAYAFPGILNRTVVSDLSKQSPFLSEWFNGTDLQFQFQHKLTQVKKRSRVVQASLSE
SGEYYTQRPPTPILDTINYPIHMKNLSLKELKQLADEVRSDTIFNVSKTGGHLGSSLGVV
ELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRREKMSTLRQTNGLAGFTKRSESEYDC
FGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVI
LNDNRQVSLPTATLDGPVAPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAA
KVDEYARGMISGSGSTLFEELGLYYIGPVDGHSIDDLISILKEVRSTKTTGPVLIHVVTE
KGRGYPYAERAADKYHGVAKFDPATGKQFKASAKTQSYTTYFAEALIAEAEADKDIVAIH
AAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQV
VHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFHMVAT
AAAIDDRPSCFRYPRGNGIGVELPVGNKGTPLEVGKGRILVEGERVALLGYGSAVQSCLA
AAAVLESRGLQVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFMALD
GLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSSIAATVFNILGQTREALEIMT
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtgtgcatatgcatttccagggattttgaacaggacagtagtttcagatctt
tcaaagcagagtccttttttatctgaatggtttaatggaacagatctgcagtttcagttc
caacacaagcttactcaggtgaagaaaaggtcacgtgtggttcaggcatcattgtcagaa
tcaggagaatactacacacagagaccaccaacacctattctggacactatcaactatccc
attcatatgaaaaatctttctctaaaggaacttaaacaactagcagatgaagtaagatca
gatacaattttcaatgtatcaaagactgggggtcaccttggttcaagtcttggtgttgtt
gagcttacagttgctcttcattatgtcttcaatgctccccaagataggatcctttgggat
gttggtcatcagtcttatcctcacaaaatcttgactggtagaagggagaagatgtcaaca
ttaagacagacaaatggacttgcaggatttactaagcggtcggagagtgaatatgattgc
tttggcactggccacagttccaccaccatctcagcaggcctagggatggctgttggaaga
gatctaaaaggaagaaacaacaatgttatagccgtaataggtgatggtgcgatgacagca
ggtcaagcgtatgaagccatgaataatgctggttacctggactctgacatgattgttatt
ttaaacgacaatagacaagtttctttacctactgctactctggatgggccagttgctcct
gttggagctctaagtagtgctttgagcagattgcaatctaataggcctctcagagaacta
agagaagtcgctaagggagttactaagcagattggtggacctatgcatgagcttgctgca
aaagttgatgaatatgctcgtggcatgatcagtggttctggatcaacattgtttgaagaa
cttggactatattatatcggtcctgtggatggccacagcattgatgaccttatttctatt
ctcaaggaggttagaagtactaaaacaacaggtccagtactgatccatgttgtcaccgag
aaaggccgaggttatccatatgctgagagagctgcagacaagtatcatggtgtagccaag
tttgatccagcaacaggaaagcaattcaaagccagtgccaagactcagtcgtacacaaca
tattttgcagaggctttaattgcagaagcagaagcagataaagacattgttgcaatccat
gctgccatggggggtgggactggaatgaaccttttcctccgtcgcttccccacacggtgt
tttgatgttggaatagcagaacaacatgcagtaacctttgctgctggattggcttgtgaa
ggccttaaacctttctgtgcaatttattcatctttcatgcagagggcttatgaccaggta
gtgcatgacgttgatttgcaaaagctgccagtgaggtttgccatggacagagcaggtctt
gttggagcagatggtcctacacattgtggtgcatttgatgttactttcatggcatgtctt
cctaacatggtagtaatggctccttctgatgaggccgagctatttcacatggtagcaact
gctgctgccattgatgacagaccaagttgtttcagatacccaagaggaaatgggattggt
gtagagcttcccgttggaaacaaaggaactccccttgaggttggaaaaggcaggatattg
gttgaaggggagagagtggctttattgggatatggctcagctgtgcagagctgtttggct
gctgctgctgtgttagaatctcgtggtttacaagtaacagttgcagatgcgcgtttctgc
aaaccactagaccgtgctctcataaggagcctcgcaaaatcacacgaggtactgatcact
gttgaagaaggatcaattggaggttttggatcgcatgttgttcagtttatggccttagat
gggcttcttgatggcaagttgaagtggagaccaatagttcttcctgatcgatacattgac
catggatctcctgctgatcagttggcggaagctggcctcacaccatcttccattgcagca
acagtatttaacatacttggacaaaccagagaagctctagagatcatgacataa
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