Lycium barbarum (goji berry): 132626937
Help
Entry
132626937 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132626937
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132626937
Enzymes [BR:
lbb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
132626937
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
132626937
Prokaryotic type
Methylthiotransferases
132626937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TraT
DUF4689
Motif
Other DBs
NCBI-GeneID:
132626937
NCBI-ProteinID:
XP_060197958
LinkDB
All DBs
Position
2:119880671..119891194
Genome browser
AA seq
624 aa
AA seq
DB search
MEDIEDLLVGTGVPPGFRLPVPAAVGVNPKKQRKKNGLTKVVQDSPTRKIPGTQTIYIKT
FGCSHNQSDSEYMAGQLSAFGYALSDNPDEADLWMINTCTVKSPSQSAMDTLISKGRSAK
KPLVVAGCVPQGSRNLKELDGVSIVGVQQIDRVVEVVEETLKGHEVRLLTRKTLPALDLP
KVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVGRVKNVIADGVREIWLSS
EDTGAYGRDIGVNLPILLNALVAELPPNGSTMLRIGMTNPPYILEHLKEIADVLRHPCVY
TFLHVPVQSGSDSVLSAMNREYTVSDFRKVVDTLMELIPGMQIATDIICGFPGETDEDFA
QTVDLIKDYKLAQVHISQFYPRPGTPAARMKKVPSNVVKQRSRELTAVFESFTPYTGMEG
KVERIWITDIASDGVHLVGHTKGYIQVLVIGPESMLGTSARVKITSVGRWSIFGEVIEIL
CQNNNKDVRSHESFDERRSPCALSEEACACSKEQEPCSATSGGCCSQSPTQEAAATLPQN
DPKEDNQSSRNLIGWFLRNRKNYSPKKVDLTSSESEEKQIQDDLGHRQSAWSSVDIALLS
GILLSLFTIVALFLNLGSRSLSSK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggaagatattgaagatttgctggtgggtaccggagttcctccaggtttccggttaccg
gtaccagcagctgttggagtcaatccaaaaaagcaaaggaaaaagaatggtttaaccaaa
gtagttcaagactctcctacacgcaaaatacctggcactcagactatttacatcaagaca
tttggatgttctcataatcagagtgattctgaatatatggctggtcagctttcagctttt
ggttatgctctgagtgataaccctgatgaggcagacctctggatgataaatacctgcaca
gtcaaatctcctagtcagtctgccatggatacgcttataagtaaaggaagaagtgcaaaa
aagccattggtagtcgcaggttgtgttcctcaaggaagccgtaatctgaaagagctagat
ggagttagtatagtaggagttcagcagattgaccgtgtggttgaggttgtggaagagact
ttgaaaggtcatgaagttcggctactaacccggaagacattaccagcacttgatcttcca
aaggtccgaaagaacaagtttgttgagattcttccaataaatgttggttgtttaggtgct
tgtacttattgcaagacgaagcatgcccgtggtcatttaggaagttacacagttgacagc
cttgtgggccgagtcaaaaatgtcattgctgatggagtgagggagatctggttgagtagt
gaagacaccggggcatatggtcgtgacattggagttaatcttcctattctattgaatgct
ttagttgcagagcttcctccgaatggaagtacaatgctccgaattgggatgaccaaccct
ccttatattcttgagcacttgaaggagatagctgatgtcttacgtcatccgtgtgtgtat
acttttcttcatgtgccagttcagtcgggtagtgattcagtcttgagtgcaatgaaccgt
gaatacactgtcagcgacttcaggaaggtggtggatacattaatggaactgatccctggg
atgcagattgcaacggatattatatgtggatttcctggtgaaactgatgaagattttgct
cagacagttgaccttattaaggactacaagcttgctcaagttcatatatcacagttctac
cctaggcccggcactcctgctgcaaggatgaaaaaggttcctagtaatgtggtgaagcaa
cggagccgtgaattaactgctgtattcgagtcctttactccatatactggaatggaaggg
aaagtagagagaatatggattactgatatagcttcagatggagttcatttggtgggacac
actaagggatacattcaggtcctggtgattggtccagaaagcatgctgggtacctcagct
agggtgaaaataacatctgtaggtagatggtcaatctttggtgaagtgatcgagatcctc
tgccaaaataataataaggatgtccgctcacatgagagtttcgatgaaaggcgctcccca
tgcgccctttcagaagaagcttgtgcctgttcaaaagagcaagaaccttgctctgcaaca
tctggtggttgctgcagtcaaagtccaactcaagaagcagcagcaacactgccgcagaat
gaccctaaggaagataatcagagtagcagaaacttaatcggatggtttctgaggaatcgt
aagaattattcacccaaaaaggtggacttaactagctcggagtctgaggagaagcaaata
caggatgatttaggtcatcgccaaagcgcttggagttctgttgatatagctcttcttagt
ggaatattattgagcttgttcacaatagtagctctatttttgaatcttggatctaggagt
ttgtcatctaagtag
DBGET
integrated database retrieval system
