Lycium barbarum (goji berry): 132626983
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Entry
132626983 CDS
T09483
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132626983
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132626983
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132626983
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-ANAPC11
Prok-RING_4
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
132626983
NCBI-ProteinID:
XP_060197999
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All DBs
Position
2:complement(122011824..122024167)
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AA seq
444 aa
AA seq
DB search
MMNLWVFCYLSVVCVLSCRALGNVVLVGKNVTLSFEDIEANFAPSVRGSGKCGTLYVAEP
LDACSTLTKKVEPVKNSTHDLFLLIVRGGCSFEDKVRRAQAAGFKAAIIYNDEYGELVAM
AGNSAGVKIPAVFVSRASGERLTKYAGAIDVEVWIIPSFENSAWSIMAISFISLLAMSAV
LATCFFVRRHRIRRERPRASRVREFHGMSSRLVKAMPSLIFTSVLEDNCTSVTCAICLED
YSVGDKLRILPCRHKFHAMCVDAWLTSWRTFCPVCKRDARTSNGDPPASESTPLLSSSLA
SISSLSSLRSSLAPSSAIQIGPRASRSPSVSRPQSISSTPYNRQSLQSYHQSPDLSISRS
SLDLQNASSQRSHASYLISPHSLGYPCLSPLNSRYMSPYIPSPGNASSSYIGSSSRHPNP
LRHSESTTSFSPFASAQSLPGCES
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatttgtgggtgttttgttacttgagtgttgtttgtgttttgagttgtagagca
cttggtaatgtggttttggtaggaaagaatgtaactttatcgtttgaagacattgaagct
aattttgctccttcagtaaggggatcaggcaaatgcgggacactgtatgtggcggagcct
ttagatgcctgctcgaccttgactaaaaaggttgaaccagttaaaaatagcacccatgat
ctattcttgctgatagtaaggggtggatgtagtttcgaagataaagtcagacgagcccag
gccgcaggtttcaaggcagccattatctacaacgatgaatacggtgaactagttgcaatg
gcaggaaactctgctggtgtgaagatacccgcagtgtttgtgtctagagcttcaggagaa
agactgacaaagtatgctggtgctattgatgttgaagtatggataatcccaagttttgaa
aactctgcctggtccatcatggctatatcattcatttcgttacttgctatgtcagcagtg
cttgctacctgcttctttgtccgtagacatcggatacgaagagaacggcctcgggcctca
cgtgttcgtgaatttcatggaatgagtagtcgtttggtgaaagctatgccaagcttgata
tttacatcagttttggaggataattgtacatcagtaacatgtgctatctgtcttgaagac
tatagtgtgggagacaagcttagaattcttccttgccggcacaaatttcatgctatgtgc
gttgacgcttggcttacatcatggagaacgttttgccctgtctgtaaacgtgatgcaaga
actagcaatggtgatccaccagcatcagaatctacaccattgctttcttctagtctagct
tctatatcgtcgttgtcatccctaagatcgtcattagctccatcatcagcaatacaaata
ggtccaagagcatcccgatccccttcagtttctcgtcctcaatcaatctctagtactcct
tataaccgccagtcgcttcagtcataccatcagtcccctgatctttctattagccgcagt
tcacttgaccttcaaaatgcgtcttcccagagatctcatgcatcttatttgatatcccct
cactcattgggctacccttgtttatctcctcttaattcaagatacatgtccccatatatt
cctagtccaggaaatgcctcatcgagttacattggctcctcaagtcggcatcccaaccca
ctgcgtcatagtgagtcgaccactagcttttcgccatttgcttcagctcagtctcttccg
ggatgtgagtcatga
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