Lycium barbarum (goji berry): 132627063
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Entry
132627063 CDS
T09483
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132627063
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132627063
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
132627063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-RING_6
RING_XB3-XBAT31
zf-RING_UBOX
zf-rbx1
Prok-RING_4
TPR_MLP1_2
zf-ANAPC11
zf-C3HC4_5
DUF1450
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
132627063
NCBI-ProteinID:
XP_060198125
LinkDB
All DBs
Position
2:complement(124685396..124699763)
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AA seq
843 aa
AA seq
DB search
METLLPLDTAVLLHQNQKLSQKLEAQKIEIAVLEDKFIELTDKQKPYDNTLAIIQKSWQE
LVAELEVCSIRTKDSLRDGNASNHQCSTECEEAFLCRLLQTGATESSSAVNSVTQMENEH
KKMDDEKIMQILRNIVATVDDIWQMKDKLCAAVLKALPEDGSCLQKSSNDLHIGVKDLRQ
AINELHLKHRFLAGALQNHRDTDAKNNAELKCLRGELEKTIAHLDESNSKLAILKAEKDA
AKGVPFPILNLGNKHSANDKARDKQRDMQDMESTLKEYLDQSSFSLFELKRLHEERIDIL
KQLSNLQNKLKNVKAICSSQPYALVKDQLAKAKEDVSLYQSLYEKLQVEKDNLSWREKET
NLKNDIIDVFRRSSTVADSRIAWLEKEIQKHMQERNMIEAKLEEASREPGRKEIIAEFKT
LVSSFPETMGNMQNQLSNYKETASDVHSLRADVQSLNSILDRKSKELETLSAKSASQVTE
MLKLQAMVNDLKESDMQLKLILEMYKRESAFSRDVFEARGSEYRAWAGVQSLKTSLDEHN
LELRVKSAIEAEANSQQKLGTAEAEIAELRQKLDASKRERSRLSEVLKSKHEETEAYLSE
IETIGQAYDDMQAQNQQLFQQITERDDYNIKLVLEGVRARQQRDCLAWETQTTERAVEDA
NAVVSSYEMKAAKIDDQLRGCSDLVQKLAEDRVQSSLALENTQKRLLDVRKSSQQSQETL
EELQSKIDKSRVDLSQLQMELEKERFERKRAEEDVEALRRKTLRLRSHIEGSSVLEKLQQ
KLREYKEILNCSVCFDRRKEVVLAKCYHLFCNPCIQKIVETRHRKCPVCSASFGANDVKA
VYI
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggaaactttattaccgcttgacactgcggtcctactacatcaaaaccaaaaactctct
caaaagctagaagctcagaagattgagattgcggttcttgaagataagtttattgaattg
acggataaacagaagccatatgataacactctagcgattattcagaaatcatggcaagag
ttggttgctgagttggaagtatgttccatccgcacaaaggattcattaagagatggaaat
gcaagtaaccatcagtgtagtacagaatgtgaggaggctttcttatgtcgccttttacaa
actggtgcaactgaaagcagctctgctgttaactctgtaactcaaatggaaaatgaacac
aagaaaatggatgatgaaaagatcatgcaaatattgcggaatatagtagccactgtagat
gacatttggcaaatgaaggacaagttgtgtgctgcagttctcaaggcgcttcctgaagac
ggatcatgcctccaaaagtcatcgaatgatttacatataggagttaaagatctcagacag
gcaataaatgaacttcatttgaagcatcgattcctggctggtgcattacaaaatcataga
gatactgatgctaagaataatgccgagcttaagtgtttaagaggggagttggagaaaacc
attgcacatttggatgaaagtaatagcaaattggctattttaaaagcagagaaagatgct
gccaagggtgtccccttccctatcttgaatcttggaaataagcactctgctaatgataag
gcgagagataagcagagggacatgcaggatatggagtccacacttaaggagtatttggat
caatcctctttcagtttattcgaactcaagcgtcttcatgaagaaaggatagacatattg
aagcagttgtccaacttacagaacaaactaaagaatgtgaaagccatatgctcttcccaa
ccatatgccttggttaaagatcaacttgcgaaagctaaggaagatgtatctctgtatcag
tccctatatgagaaactacaggtggagaaagacaatctttcgtggagggaaaaagaaacg
aatttgaagaatgatataattgatgtttttcggcgatcttccaccgttgctgattccaga
atagcctggctagaaaaggagatacaaaaacacatgcaagaaagaaatatgattgaggct
aagctcgaagaagcatcaagagaacctggtaggaaagaaattatcgcagaatttaaaacg
ttggtttcttcattccctgaaacaatgggcaatatgcagaatcaactaagtaattataag
gagactgcttcagatgttcattcactacgagctgatgttcagtcacttaacagtattctt
gatcggaagtcgaaagagttagaaacgttgtctgccaagtcagcttcccaagtgactgaa
atgctgaagttgcaagctatggttaatgatttgaaagagagtgatatgcagttaaagctc
attttggaaatgtataagcgtgaatctgctttctcaagggatgtttttgaggctcggggt
tctgagtacagagcttgggctggtgttcagagtctgaagacttctcttgatgaacacaat
ttggaattgagagtgaaatctgctattgaagccgaggctaactcccagcagaagctaggt
actgcagaagctgagattgcagagctgagacagaagctggatgcttctaaaagggaacgg
tccagactctcggaagtcttgaagtcgaagcatgaagaaactgaggcctacctatctgag
atcgagacaattgggcaggcctacgatgatatgcaagctcaaaatcagcagctcttccag
caaatcacagagagagatgattataatatcaagcttgttttagagggagtacgggcaaga
caacagcgggattgtttggcctgggaaactcaaaccacagagagagcagttgaagatgcc
aatgcagttgtcagttcctatgaaatgaaagctgccaaaattgatgaccagttgagggga
tgctcagacttagttcagaaacttgctgaagatagggttcagagttctcttgctttggag
aacacccaaaaacggttgttagatgtaagaaaatcttcccagcaatcgcaggagacactg
gaagaattgcaatccaagattgacaaaagtcgagttgatctttcacagttgcagatggaa
ctagagaaagaaaggtttgagagaaaaagagcagaggaggacgtggaagctctgaggaga
aagactttacgtttgagatcacacatcgaagggtcatctgttcttgagaagcttcagcag
aaactaagggaatacaaggaaatactcaattgtagtgtttgctttgataggcgaaaagag
gttgtcctcgcgaaatgttaccatctcttttgtaatccgtgtatccaaaaaattgttgag
actcgtcaccgcaagtgccccgtttgctctgcaagttttggagcaaatgatgtgaaggct
gtttatatctga
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