KEGG   Lycium barbarum (goji berry): 132627066
Entry
132627066         CDS       T09483                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03082  ATP-dependent chromatin remodeling
lbb03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    132627066
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    132627066
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lbb01009]
    132627066
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lbb03021]
    132627066
   03036 Chromosome and associated proteins [BR:lbb03036]
    132627066
Protein phosphatases and associated proteins [BR:lbb01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     132627066
Transcription machinery [BR:lbb03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     132627066
    SWI/SNF complex
     132627066
Chromosome and associated proteins [BR:lbb03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    132627066
   PBAF complex
    132627066
   SWI/SNF complex
    132627066
SSDB
Motif
Pfam: SNF5 GP70 Methyltr_RsmF_N
Other DBs
NCBI-GeneID: 132627066
NCBI-ProteinID: XP_060198127
LinkDB
Position
2:124727773..124738205
AA seq 241 aa
MKPHSAWGSLKNPVKFKISTSENLVPIRLDIEIDGQRFRDAFSWNPNDPDSEVVVFAKRT
VKDLKLPPAFITQIAQSIQSQLTEFRSYEGQDMHTGERVVPIKLDLRVNHTVIKDHFFWD
LNNFESDPEEFARTFCKDMGIEDPEVGPAIAISIREQLYEIAIQSVASAKESRAIKKGRR
GTEHLSANKTGLPALDLVKLFGIRSSVVRKRRDWDVYEPIVDLLSNEEVDALEAREEKIA
R
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaaaccgcattcggcatggggctcactgaagaaccctgtgaagttcaagatttcaaca
tctgagaatcttgttcctatccgtctggacatcgaaattgatggtcaaagatttagggat
gcttttagttggaacccaaatgatcccgactcagaggtggtggtgtttgcgaagagaact
gtgaaggatttgaaacttcctcctgctttcatcactcagattgctcaatccattcaatcg
caattgacagaatttcggtcttacgaaggacaagatatgcacactggcgagagagttgtt
cctatcaagcttgatctccgagtaaatcacacagttatcaaggaccattttttctgggac
ttgaacaactttgagagtgatcctgaagaatttgcaaggacattttgtaaggatatggga
attgaagatccagaagttggacctgcaattgccatatcaattcgtgaacaactttatgag
attgcaattcaaagtgttgcatccgcgaaagaaagcagggcaattaagaaaggacgcaga
ggaacggaacatctctcagccaataaaacaggattgcctgcattggacctggtgaagcta
tttggcattagatcaagtgtcgtccgaaaaaggagggactgggatgtatatgaaccaatt
gtcgatctcctgtcaaatgaagaggtggatgccctcgaggctagagaagagaagattgct
cgttga

DBGET integrated database retrieval system