Lycium barbarum (goji berry): 132627140
Help
Entry
132627140 CDS
T09483
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132627140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132627140
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
132627140
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132627140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-GeneID:
132627140
NCBI-ProteinID:
XP_060198281
LinkDB
All DBs
Position
2:complement(127264419..127269260)
Genome browser
AA seq
389 aa
AA seq
DB search
MQSLRILSVMKRPIIIPSTPSTPPSPQTTLHSKTTTFKSLSSKKPRNILTNPTPTTTTTT
EQEPIWIPLNLSSSELYLPLTFPTGQTFRWKQTGPTQYTGVVGRSHLVSLKQLDNGDVGY
HFYCTRDNCDASDALLDFLNVGISLNEVWEGFKANDTRFAELAIHLRGARVLRQDPLECL
VQFICSSNNNIKRITMMVDFISSLGNYLGDVGGFKFYEFPSLERLAMVSEQDLRAAGFGY
RAKYIVGTVEALKSKPGGGTEWLAALRKVDLPEAIASLCSLPGVGPKVAACIALFSLDQH
HAIPVDTHVWKIATRYLLPELAGTSLTPKLHNRVADAFVRTYGKYAGWAQTLLFIAELPS
QKALLNSTEEKSPNPKKRKLGWITEVLKE
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcactgagaattctctcagtaatgaagagaccaataatcattccttcaacccca
tcaactccaccatcaccacaaacaactctccattccaagacaacaacttttaaatcactt
tcttccaagaaaccaagaaatattctaacaaatcctaccccaacaacaacaacaacaaca
gaacaagaaccaatatggatacccttaaacttatcaagctcagaactttacttacccctc
actttcccaacaggccaaacattcaggtggaaacaaacaggacccacacagtacactggt
gttgttggtaggtcccatttggtctcactaaaacagcttgacaatggtgatgttgggtac
catttttattgcactagggacaattgtgatgctagtgatgcacttcttgattttctcaat
gtgggtatttctttaaatgaagtttgggaggggtttaaggctaatgatacaaggtttgct
gaattggctatccatttaaggggtgctagagtacttagacaagatcctcttgagtgtctt
gttcagtttatttgctcatctaataataatattaagagaattactatgatggttgatttt
atttcatcattggggaattatttgggagatgttggaggtttcaagttttatgagttccct
tcacttgaaaggctggcaatggtttctgaacaagacctaagagctgctggttttggctac
agggccaaatatatagttggtaccgtggaagcactgaaatcaaagcctggtggaggtacg
gagtggcttgctgcacttcgtaaagtagatcttcctgaggccattgcttcgctttgctct
ctacctggtgttggtcctaaggtggcagcatgtattgctctcttctctctagatcagcac
catgctattcctgttgatactcatgtgtggaagatcgcgaccaggtacctcctccctgaa
ctggcaggaaccagtcttacgcctaaacttcacaatcgtgtggcagatgcttttgtgagg
acatatggaaaatatgctggttgggctcaaactctgcttttcattgcggaactaccttca
cagaaagcactcttgaattctacggaagagaagtctcctaatcccaaaaaaagaaaactg
ggttggatcacagaggtccttaaagaatga
DBGET
integrated database retrieval system
