Lycium barbarum (goji berry): 132627445
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Entry
132627445 CDS
T09483
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03013
Nucleocytoplasmic transport
lbb03015
mRNA surveillance pathway
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132627445
09122 Translation
03013 Nucleocytoplasmic transport
132627445
03015 mRNA surveillance pathway
132627445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132627445
03041 Spliceosome [BR:
lbb03041
]
132627445
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
132627445
Spliceosome [BR:
lbb03041
]
Common components
Common spliceosomal components
Cap binding complex
132627445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
MscS_porin
LMWPc
Motif
Other DBs
NCBI-GeneID:
132627445
NCBI-ProteinID:
XP_060198779
LinkDB
All DBs
Position
1:complement(146151..162812)
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AA seq
861 aa
AA seq
DB search
MSSWKNLLLRLGEKCPEYAGNADFKDQIEACFSVVRREIEHSGDDVFPFLLQCAEQLPHK
IPLYGTLIGLLNLENEEFVRKLVENAQINLQDALETGQCNKIRILMRFLTVLMCSKVIQP
SALVVVFESLLSSAATTVDEEKGIPSWQARADFYITCILSCLPWGGAELVEQVPEEIESV
MVGVEAYLSIRRRVSDAGVSVFEDIEETNNAVNEKDFLEDLWSRVQDLSNRGWKLDSVPR
PHLSFEAQLVSGKSHDLSPVSCPEQPGPPGVLSGIAFGRQKHEAELKYPQRIRRLNIFPS
NKTEDLQPIDRFVVEEYLLDVLFFLNGCRKECAAYMVGLPVPFRYEYLMAETIFSQLLLL
PQPPFRPIYYTLVIIDLCKALPGAFPAVIAGAVRALFDKIADLDMECRTRLILWFSHHLS
NFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKIKQSVENAPALEELLPPR
GGGQFKYGAEDGTDPTERALSLELKDMVKGRKTAREMISWVEENVFPVHGFDVTLGVVVQ
TLLDIGSKSFTHLITVLERYGQVIAKMCTDDDQQVKLIAEVSSYWQNNAQMTAIAIDRMM
SYRLISNLAIVRWVFSSSSLDRFHVSDSPWEILRNAVSKTYNRISDLRKEISSLEKSIVL
AEGAASRARQELESAESKLSIIDGEPVLGENPVRIKRLKSYAEKAKEEEVSVRESLEAKE
ALLARAVDEIEALFLSLYKSFLAALAEPLHDASRDGTLRPSGHADDMAIDLEDSSVMELD
KDDERPKKSHPNGSRERNGYNLDEKQQWCLTTLGYLKAFTRQYASEIWPHIEKLDAEVLT
EDIHPLVRKAIYCGLRRPLDE
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggaagaatttgcttttgcgactgggcgagaagtgccctgaatacgctgga
aatgctgacttcaaagatcaaattgaggcatgctttagtgtggttcgccgggaaattgag
cattctggggacgatgttttccccttccttctccagtgtgctgagcagttgcctcacaag
atacctctgtatggaacactgataggccttttgaatttggaaaacgaggaatttgtcagg
aaattagtggagaatgctcaaattaatttacaggatgcgttggagactggacagtgcaac
aagatccgtatattgatgaggtttttgactgttttgatgtgcagcaaagttatccaacca
agtgcactagtggttgttttcgaaagtttactatcatcagcagcgactactgtggacgaa
gaaaaaggaattccctcttggcaagcacgtgctgacttctatattacttgtatcttatcg
tgccttccttggggtggagctgaacttgttgagcaagttcctgaggagatcgaaagtgtt
atggttggtgtagaagcctatttaagtattcgaagacgtgtgtctgatgctggggtttct
gtctttgaggatattgaagaaaccaataatgctgtcaatgagaaggatttcttggaggat
ttgtggtctcgagttcaagatctgtctaatagagggtggaaacttgatagtgttcccaga
ccacacctatcttttgaggcacagctggtttctggaaagtctcatgatttgtctccagta
agctgccctgagcaaccaggtcctcccggagttttatctggaattgctttcggtagacaa
aagcacgaagctgagttaaaatatcctcaaaggataaggaggcttaacatatttccttca
aataaaactgaggatcttcaacccattgatcgctttgttgtggaagagtatttattggat
gtgcttttcttcttgaatggatgtcgaaaggaatgtgctgcgtacatggttgggctgcct
gtaccattcagatatgaatatcttatggctgagacaatattctctcagcttctcttgtta
ccccaaccgccattcagaccaatatattacacattggttatcattgatttatgcaaggct
ctgccaggggcctttccggcggttatagctggagctgtccgtgctctttttgataaaata
gcagatctagacatggaatgtcggacacgtcttatcctttggttctcacatcatctgtca
aactttcaatttatctggccatgggaagaatgggcatatgtgttagatcttccaaaatgg
gccccacaacgtgtgtttgttcaagaggttttggaaagggaagtccgtctttcgtattgg
gacaaaatcaagcagagcgttgagaatgcccctgctttggaggagttacttccaccaaga
ggtggtggacaatttaaatatggtgcagaagatggtactgatccaactgagcgtgcactt
tctttagaacttaaggacatggtcaaaggtaggaaaactgcccgtgaaatgatttcctgg
gtagaagaaaatgtttttccagtccatggttttgatgttaccctcggagttgttgttcaa
acacttctcgacatcggatccaaaagctttactcatttgattactgtcttggagagatat
ggccaagtcattgcaaagatgtgcactgatgatgatcaacaagttaagctaattgctgaa
gtaagttcttactggcaaaacaatgctcaaatgacagctatagcgattgaccggatgatg
agttatcggcttatatctaatttggccatagtgagatgggttttctcttcatcgagtctt
gatcgatttcatgtttctgacagtccatgggagatcctcaggaatgctgtcagtaagacg
tataatcggatttctgatctaaggaaagagatctcatcccttgagaaaagtattgtcttg
gcagaaggagctgcatctagagccagacaagagttggaatctgccgagtctaagctgagt
atcatagatggggaacctgttcttggtgaaaaccctgtaagaataaaacggctaaaatca
tatgctgaaaaagcaaaagaggaggaggtatctgttcgtgaatctttagaagcaaaggaa
gctctccttgctcgagcagttgatgaaattgaggctttgttcctttcactgtataaaagc
ttcttggctgctttagcggaaccccttcatgatgcatccagagatggaaccttgcggccc
tctggtcatgcagatgatatggccattgaccttgaagattcttcagtgatggagttagac
aaggatgacgaaagaccaaagaaaagtcatcctaatgggagcagagaaagaaatggctat
aatcttgatgaaaaacagcaatggtgtttaacaactctgggttacctcaaggccttcacc
aggcaatatgcttcagagatatggccgcatattgagaagttggatgccgaggtactaact
gaagatattcatcctctggttcgaaaagctatatactgtggattgcgaagacctttggat
gaatga
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