Lycium barbarum (goji berry): 132627448
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Entry
132627448 CDS
T09483
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132627448
Enzymes [BR:
lbb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
132627448
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
132627448
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_12
Methyltransf_31
MetW
Ubie_methyltran
CMAS
Methyltransf_9
DUF2226
Motif
Other DBs
NCBI-GeneID:
132627448
NCBI-ProteinID:
XP_060198781
LinkDB
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Position
2:complement(135684180..135687626)
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AA seq
388 aa
AA seq
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MLFGVGTARSFCFKRIYTDSTLIVGYIFSRRSFSSMKEVGIESASSFPTSQSVGEAPVLR
HVSVRSKCSSNVQSTPEIEKKYVHGVYDAIAPHFSSTRFAKWPKVSAFLSSLSPGSLILD
AGCGNGKYLGLNPDCFFIGCDISAALINICTDRGHEVLVADAVNLPYRTGYGDAAISIAV
LHHLSTENRRRKAVEELVRVVKKGGSVLITVWAREQEDRSLIEKWTPLNQRYVEEWIGPG
SPRVRNPSSPRILESIPEAEENGAGERLKGLRAKSSKVKLAEDMQSISLDEGHSFPAGSE
KGYAEQQEYFVPWHLPYHRAEVSGASAVALASGLAKKDDKKGSVVYNRYYHVFSEGELER
LVSGLDNAILVDRFYDKSNWCIILEKTS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgctctttggtgttggaacggcaaggtcattttgtttcaaacgaatatatactgattct
actctcatagttggttatattttcagtagaagaagttttagttcaatgaaagaagttgga
attgaaagtgcctctagttttcctacatcgcaatctgtgggagaggctcctgttctacgt
catgtgtctgtgagatcaaaatgctcttcgaatgttcaatcaaccccagaaatcgaaaag
aagtatgtccatggtgtttatgatgccattgctccccatttcagttccactcggtttgca
aagtggcctaaagtgtcagctttcttgagctcattatctcccggttctctcatcttagac
gctggatgtggaaatgggaaatacttaggattaaatcctgattgtttctttattggctgt
gacattagtgcagctcttatcaatatatgtacagatagaggacatgaagtgttggttgca
gatgctgtgaacctaccatataggactggttatggtgatgcagcaatttctattgctgtg
ttgcatcacctaagtactgaaaataggaggaggaaagcggtagaggagcttgtccgtgtt
gttaaaaagggcgggagtgttttaattactgtctgggctagggaacaagaagacaggtca
ttaattgaaaaatggacaccacttaaccaaaggtatgtagaggaatggataggaccaggg
agtccacgagttcgcaacccttcatctcctcgcatccttgaaagcatcccagaagcagag
gaaaatggtgccggggagcggttgaaaggcctacgtgcaaagtcttcaaaagtaaaatta
gctgaagatatgcagtcaatctctctggatgaaggtcattctttccctgctggatctgaa
aaaggctatgcagagcagcaggaatattttgttccctggcacttaccttatcatcgagct
gaagtaagtggggcttcagctgttgccttggctagtggtttggcaaagaaagatgataag
aagggctctgtggtgtataatagatattaccatgtttttagtgaaggtgaacttgaaagg
ttggtgtctggtctggataacgccattcttgttgatagattctatgataaatcaaattgg
tgcatcattcttgagaaaacatcgtga
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