Lycium barbarum (goji berry): 132627471
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Entry
132627471 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132627471
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03013
Nucleocytoplasmic transport
lbb03015
mRNA surveillance pathway
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132627471
09122 Translation
03013 Nucleocytoplasmic transport
132627471
03015 mRNA surveillance pathway
132627471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132627471
03041 Spliceosome [BR:
lbb03041
]
132627471
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132627471
Spliceosome [BR:
lbb03041
]
Complex C
Other components
EJC/TREX
132627471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
132627471
NCBI-ProteinID:
XP_060198816
LinkDB
All DBs
Position
2:136435304..136442628
Genome browser
AA seq
823 aa
AA seq
DB search
MSDYPVLDNRPINKWKVAELREELKRRNLTTKGLKDDLVRRLNEDMCKEMEAAEVEESKD
DDRDIDPANGLEDTEPEPDPVKLVDEVLDHPQSEVTKGSDHITDSACGLEDTQPNSSPAK
LVDNVQKHHQDEVNDIDGDDTRASTKNCLVEIEQNKVLDEVATGGTDAAAGESRHSEAPV
HSTSVINKIASTDQFIEDKPDKEHKVIDSSQDNYVVDGVSGVQDVSIPGSCTGQDAEDMK
ISSSEGVLEDNLRRQENDVEVTPVTSSIKLDNEGLKPSGMDAEPDMSNPATQVYEVNPNL
GSQVKSDSFSTDTLPINENKDLNDNLNADNVKLETEVVRQEMELQSSSKDLSDVGSSHPL
DDQMPHEMQGLVGETDDDESSDVKFSMKNDNADQVSVDVAKVEHGLESKTSNNSEQTDIQ
FDNARTLGDVVEPSLSPKNIEGSAEDKHGLTASGDDRKDFSKINDLGDGENMEKINLDQS
DDSMEEDVLETKHVDFDHISKENDKTEEPITVMTEDPKVRLSGSSDAMQLDIPSEKVESQ
ETKDKSPDLSEKRKFQDEAGGGSKEPAKRQRRWNTESLKTAEPQNSSVALSKNVVQTTPV
KPILGRTNSTVGGDAPKERIVPKSSETATNSLKIENFLRPFTLKAVQELLGRTGEVCSFW
MDQIKTHCYVTYSSVEEAIETRNAVYNLQWPPNGGRLLVADFVDPQQVQTKVEGREPAFP
PKNASPAVPPASSSVQTPPAQQQGRKQQAESEHPLARQPAPAPPSAPPTKEMLPSPVADK
NDPPIVTLDDLFRKTKATPRIYYLPLTDEEVAKKLAIRGNAKH
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattaccctgtgcttgataatcgtccaattaataaatggaaagtagcagaatta
agggaagagcttaagaggaggaacttaacaacaaaagggttgaaggatgatctggttagg
cgattaaatgaagatatgtgcaaagaaatggaagctgctgaggttgaagagagtaaggat
gatgatcgtgacatcgatcctgcaaatggtcttgaagatactgaaccagagcctgatcct
gttaaattggtcgatgaggttctggatcacccccaaagtgaagttactaagggttctgat
catattactgattctgcctgtggtcttgaagacactcaaccaaatagtagccctgctaaa
ttggttgataatgttcagaagcatcaccaagatgaagttaatgatattgatggtgatgat
actagggccagcaccaagaattgtcttgttgaaatagagcagaacaaagtgttggatgag
gttgcaactggaggtactgatgctgctgctggagaatcaagacattcagaggcacctgtc
catagcactagtgttataaataagattgcgtctactgatcaatttattgaagacaaacct
gataaggaacacaaggttattgattcttctcaggataattatgttgttgatggggtatct
ggagttcaggatgtttctattccaggcagttgcactggacaggacgctgaggatatgaaa
atttcatcttctgagggagtgcttgaggacaaccttaggagacaagaaaatgatgtggag
gtaaccccagtaacatccagcattaagttagataatgagggtctgaaaccctcaggcatg
gatgctgagccagatatgtcaaatccagccactcaggtatatgaggtgaaccctaattta
gggtctcaagtaaaatctgactcattttctactgatactttgcccattaatgaaaataaa
gatttaaatgataatttgaatgctgataatgtcaaattagaaactgaagttgttaggcaa
gagatggagctgcagtcatccagcaaagacctatcagatgttggcagctctcatccattg
gatgatcagatgccacatgagatgcagggtcttgttggagaaactgatgatgacgaatct
tcagatgtgaaatttagcatgaaaaatgacaatgcagatcaggtttctgttgacgttgcc
aaggtagagcatggtttggagagtaagacttcgaataatagtgagcaaaccgatatacag
tttgacaatgctagaactttaggtgatgttgttgagcctagtttgtcacctaagaacatt
gagggatctgctgaagataaacatggtcttactgcttccggtgatgatagaaaagatttt
agcaagataaacgatctaggggatggtgagaatatggaaaagataaacttggatcagtct
gatgattccatggaggaggatgtactagagacaaagcatgtggattttgatcatatttct
aaggagaatgataagacagaagagcctattacggtaatgacagaagatcccaaagttcga
ctgagtggttcttctgatgcaatgcagctagacattccttctgagaaggttgagtctcaa
gaaactaaagataagtctcctgatttgtcagagaagaggaagtttcaagatgaagcagga
ggtgggagtaaagagcctgctaaaaggcagcgtagatggaacactgagagtttgaagact
gctgaaccacaaaattcaagtgttgctttatcaaagaatgttgttcagaccacccctgtc
aaacccatccttggccggactaactctacagttggtggggatgcacctaaggagcggatt
gtaccaaagtcttccgaaacagccactaattctctcaaaattgagaacttcttgcggcct
tttacattgaaagctgtgcaagagctccttggaagaacaggtgaagtctgcagtttctgg
atggaccagataaagacccactgctatgtcacgtattcttcggtagaagaagccatagag
acccgaaacgctgtttacaatctccaatggccaccaaatggaggtcgtctcctggttgca
gattttgttgatccccaacaggtgcaaaccaaggtagagggtcgcgaacctgcttttcca
ccgaaaaatgccagtcctgctgtgcctccagcttcatcttctgttcaaacaccacctgcc
cagcagcagggtcgcaaacagcaagctgagtcagaacatccactcgcacgccagccagca
cctgctcctcctagtgctcctccaacaaaagagatgctgccttcacctgttgctgataaa
aatgatccccctattgtaactttggatgacctcttcagaaagaccaaagccactccccgt
atctattatttaccattgacagatgaagaagttgctaaaaagcttgccattaggggaaat
gctaagcactag
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