Lycium barbarum (goji berry): 132627504
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Entry
132627504 CDS
T09483
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132627504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbb03041
]
132627504
Spliceosome [BR:
lbb03041
]
Common components
Common spliceosomal components
SR proteins
132627504
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
RRM_5
Motif
Other DBs
NCBI-GeneID:
132627504
NCBI-ProteinID:
XP_060198865
LinkDB
All DBs
Position
2:137599667..137605770
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AA seq
261 aa
AA seq
DB search
MSHFGRSGPPDIKDTFSLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYQDEAQKAVEKLDGRVVDGREIMVRFAKYGPNAERIDKGRILEPVDRTKGKSRSR
SPRPRHRDHYRDRDSKRRSRSRSRGRYDRDQYRGRDKDYRHRSRSRSPDYHKGRGRGKYD
EERRSQSRSHGSASPARRSPSPARRSPIPRRSPSPRRTTPSRDASPDGRNHKGRSPTPKS
ISPRGRRAGSRSPLPHSDADD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatttcggtagatctggtccaccggacatcaaagacacattctctttgctagtt
ctcaacgttactttccgtaccactgctgatgatttgtttccgttattcgataagtatggg
aaagtcgttgatgtctttatccctagagaccgaaggactggagattctaggggttttgca
tttgtgcgctacaagtatcaggatgaggctcaaaaggcagtggaaaagctcgatggaaga
gttgtagatgggcgggaaataatggttcgatttgcaaagtacggcccaaatgctgagaga
attgacaaaggtagaattttggagcctgtagataggacaaaaggaaagtcaagaagccgc
agtccaagaccaaggcatcgagatcattatagggacagggattctaaaaggagaagccga
agtagaagtagggggaggtatgaccgtgatcagtaccgtgggagagacaaagattaccgt
catcggagcagaagccgcagccctgattaccacaaaggtcgtgggagaggtaaatatgat
gaggagaggcgcagccaaagtcggtctcatggaagtgcctcccctgcacgccgaagcccc
tcccccgctcgccgcagccccattcctcgaaggagcccttctccacgtagaacaacccct
tctagagatgctagtccagatggacgtaatcacaagggccggtctcctactccaaagagt
atctcaccgcggggtagacgtgctggttctcgcagccccttgccgcattctgatgctgat
gattaa
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