Lycium barbarum (goji berry): 132627516
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Entry
132627516 CDS
T09483
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
132627516
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
132627516
NCBI-ProteinID:
XP_060198882
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Position
2:137927376..137932799
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AA seq
680 aa
AA seq
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MSSGGCSIVWFRRDLRVEDNPALAAAVRAGAVIAVFIYAPEEEGHYYPGRVSRWWLKQSL
AHLDSSLKSLGTSLVTKRSTDSISSLLEVVKSTGATQLFFNHLYDPISLVRDHRAKEVLT
AQGISVCSFNADLLYEPWEVNDDEGRPFTTFSAFWERCLSMPYDPEAPLLPPKRIVSGDA
SRCLSDNLVFEDESEKGSNALLARAWSPGWSNADKALTTFVNGPLLEYSQNRRKADSATT
SFLSPHLHFGEVSVRKVFHFVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH
PYSHERPLLGHLRYFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFVGYKCD
PHGEYVRRWLPELARLPTEWIHHPWNAPESVLEAAGIELGYNYPLPIVEIDAAKVRLEQA
LSQMWQDEAAARAAIENGMEEGHGDSADSPIAFPQAMHTDMDHEPVRNNHPVIVTVRRYE
DQMVPSITSSLFRADDEENSVEIRNSVVDNRAEVPTDVNVAEDPRRDTVDQAVMQTARTN
ATPHFNFAVGRRNSEDSTAESSSSTRERDGGVVPVWSPTSTNYSDQYVGDDNGIGTSSSY
LQRHPQSHQLMNWQRLSQTG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggtggttgtagtatagtatggtttagaagggatctaagagtggaagataat
cctgccttggctgctgctgttagagcaggtgcagttattgctgtgtttatatatgctcct
gaagaagaaggacattattatcctggtagagtttcaagatggtggcttaagcagagttta
gctcatcttgattcatctttgaagagtcttggaacttcacttgttacaaagagatctact
gatagtatttcatctcttcttgaagttgtcaaatctactggtgctactcagcttttcttc
aatcatttatatgatccaatttctcttgtgagggatcatcgcgcaaaagaagtcttaaca
gctcaaggtatatctgtgtgctcctttaatgccgatttgctctatgaaccatgggaagtt
aacgatgatgaaggtcgcccgttcacaacgttttctgctttttgggaaagatgtcttagc
atgccttatgatcctgaagctccacttctcccacctaaaaggattgtatctggtgatgca
tcaagatgcctttcagacaacttggtatttgaagatgaatcagagaaaggaagcaatgca
cttcttgctcgggcatggtcaccaggctggagcaatgctgataaagcactaactactttc
gttaacggaccattacttgagtactcacagaaccgtcggaaagctgatagtgcaaccacg
tcctttttgtctccacatttacattttggggaagtcagtgttcgtaaggtattccatttt
gttcgcatcaagcaagtcctctgggccaatgaaggaaataaagctggtgaagaaagtgtc
aatttgtttctcaagtccattgggcttagggagtactcaagatacatgagttttaatcat
ccttatagccatgaaaggcccctgcttggtcacctaaggtacttcccatgggtagtggat
gagggctattttaaggcatggaggcaaggtagaacaggttatcctttggttgatgctggt
atgcgggagctatgggccactggctggctacatgatcgtatccgagtcgtggtatctagt
ttctttgtgaaggttctgcagctcccgtggcggtggggaatgaagtatttttgggacaca
ttgttagatgcagaccttgagagtgatgctcttggttggcaatatatatctggtacccta
cctgatggtcgtgagtttgatcggattgataacccacagtttgtgggatacaagtgtgac
cctcatggagaatatgtaaggcggtggcttcctgaactcgctaggctgcccaccgaatgg
atacaccacccatggaatgcaccagaatctgtacttgaagctgctggcattgagcttggt
tacaattatcctcttccaatcgttgaaattgatgcagcaaaagttagactagaacaagcc
ctatcacaaatgtggcaggatgaagcagctgcaagagctgcgattgagaatggtatggaa
gaaggacatggcgactctgctgactccccaatagcatttcctcaggccatgcatacggat
atggaccacgaaccagtcaggaacaaccaccccgtaatagttactgttcgacgctatgaa
gatcaaatggtgccaagcataacgtcatctttgttcagagctgacgatgaagagaactct
gtggagattaggaattcagtcgtggacaatagggcagaagttccaacagacgtcaatgta
gctgaagatcctaggagagatacggttgaccaagccgtcatgcaaacagctcgaaccaac
gccactccacattttaattttgcggtaggtaggaggaattctgaagattcaacagcagaa
tcttcgagtagtactagagaaagggatgggggtgtagttcctgtatggtctcccacaagt
actaactattcagaccaatatgttggtgatgataatggtattgggaccagttcatcttac
ttgcaaaggcatccacagtctcaccagctaatgaactggcagcggctttctcaaacaggg
tga
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