Lycium barbarum (goji berry): 132627618
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Entry
132627618 CDS
T09483
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lbb01002
]
132627618
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132627618
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132627618
Peptidases and inhibitors [BR:
lbb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132627618
Ubiquitin system [BR:
lbb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132627618
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Tubulin-binding
Motif
Other DBs
NCBI-GeneID:
132627618
NCBI-ProteinID:
XP_060199040
LinkDB
All DBs
Position
2:140433641..140444151
Genome browser
AA seq
1180 aa
AA seq
DB search
MLVGGDLGFLSSLVVAAFVAVFGPVLGFVVRRKWRRSVARREEIKRLLVLASEEAARVEL
QAAQEYGYGYGYGYSNSYDDPLKEEDDVASTTTTTTISSSTSTTTTSTSYSGGSRQLQYQ
CAVCSSPTSTRCKQCKAVRYCSGKCQILHWRQGHKDECRPVSNLDHHNDVEAKSHLKAYK
QEPNGSHLKSTEVQGRHSSESGDASPEDAALLRSKHSATSDGKHATVGQSLTETKSPNLN
SSFVLNSSSCEHLDLSTSSESSVDHSASDSNDSDASDSHRSAVIDTVKIQTSHSKVDRFK
PSYTEQPQLVCIADNDSTSGKYNRTKPSIHGEARSKYSTSTSSSIDNSSESSLTAATHSS
GFWEGAVPYTRSRIGSLDNIANSPSRNACDIKISDSQSTSCRPPQIARPLIAGLGEQGSN
SKKNLENPNPIIVEVRKPVNRAESRFEVKDETESRRSSASRSVPLNQLDVHDSRAKCTLS
SEEARCSSSSASGNLKNHDGLKVSRLPSSSPSKSYRGVEGSTGVLQMPKDRQKESSPAKV
SGNISSSNGRHDIQNVKSAKVDSTQVASACSAESSVPLPNARNGLKSVWTFVDQLRGSKP
TRLNSPGDGCEVIGRYDNKGLFPYESFVKLHNWKNELRPFGLVNCGNSCYANAVLQCLAF
TPPLTSYFLQGLHSKTCEKKGWCFTCEFEHLVLKAKDGISPLSPSSIISHLESIGSNLGN
GREEDAHEFLRYVIDTMQSICLKEAGVTAPGSFEEETSLVGLTFGGYLRSKIECMRCGGK
SERQERMMDLTVEIDGDIGTLEDALKQFTHTETLDGENKYRCGRCKSYEKAKKKLKVLEA
PNVLTIALKRFQSGKFGKLNKTIKFPEILNLAPYMSGTSDKSPVYQLYGVVVHLDVMNAA
FSGHYVCYVRNFQNKWYKVDDSSVRSVELESVLSKGAYMLLYSRCSPRAPRIMRSLTIPR
DPRRSKQLTCKSRSHTRSPWDSSHGDSAAQTCNECSYPSHTSVRPSRSIFEDDSSSEQSS
FFSEHGSCSTDSTNRDSMSTDDLNIDIFGESGSSWSYPMRSSSDSDTSSSSSSPSPLYSR
HSPLADLDRYASAHEETTCSYGGNAEAVGDGQGFWTGLPDRIGYAAVPESNGRTPSLCPN
STKHCRKVVSSHSSSKTDSSRLGRVNPCDKSKSPVTCRDR
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgggaggggatctagggtttctatcgagcttagtggtggcggcttttgtggcg
gttttcggaccggttttagggtttgtggttcgccggaaatggcggcgttcggtggccagg
agggaggagatcaagaggcttttggttttggcttcggaggaggcagctagggttgagcta
caagccgctcaagaatatggctacggttacggttatggatatagtaatagttatgacgat
cctctgaaagaggaggatgacgtggcatcaacaacaacaacaacaacaatatcgtcatca
acatcaacaacgactacttcaacatcatattctggtggttcaaggcaattgcagtaccaa
tgtgcggtttgttcttctccaacatctactcggtgcaagcaatgtaaagcagttcgctac
tgctctggcaaatgtcaaatccttcattggagacaaggtcacaaagatgaatgccgtcca
gttagcaacttggatcaccacaatgatgttgaggcgaaatctcatctgaaggcatataag
caggaaccaaatggtagtcatcttaagagcactgaggttcaagggagacattcttcagaa
tcaggcgatgcttccccagaagatgctgcacttttgagatccaaacactctgcaacatct
gatggaaagcatgccacagttggacagagtctgacagaaacaaaaagtcccaatttgaac
tccagtttcgtgctcaactcatcttcatgtgaacatttggacctctctacttcaagtgaa
tcttctgttgatcattctgcttctgattcaaatgactctgatgcttctgacagtcatagg
tctgctgttattgatacagttaaaattcagactagtcattccaaagtagacagatttaag
ccatcctacacagagcaaccccaactggtatgcattgcagataatgattccacgtctggc
aaatataatcgcaccaagcctagcattcatggggaggctcgatctaaatattcgacttca
acaagttcaagtattgataactccagtgaatcatcattgacagctgctacacactcatct
ggtttttgggaaggagcagttccttatactagatctaggattgggtcacttgataatatt
gcaaattctccttccagaaatgcttgcgacatcaagatttcagattctcaatcaacttca
tgtcggccccctcaaattgctagacctcttattgctgggttaggcgaacaaggatcgaac
tcaaaaaagaatctggaaaatccaaatccaattattgtggaagtgcggaaaccagtcaat
cgagctgaatcaagatttgaagttaaagacgagacagaaagtaggagatcatcagcttcg
cggtctgtacctttgaatcagcttgatgtgcatgactcccgtgctaaatgcacattgtcc
tccgaggaagctagatgctcctcatctagtgcttctggtaatttaaagaatcatgatggg
ttaaaagttagtaggctgccatcctcaagccccagcaagtcatatcgtggcgttgaaggc
tcgaccggtgttttacaaatgccaaaagatagacaaaaggaatcttctcctgccaaagtt
tctggtaatatctcttctagcaatgggaggcatgatattcaaaatgtgaagtcagcaaag
gttgatagtactcaagtggctagtgcctgttctgcagagtctagtgttccattaccaaat
gcaaggaatggcttgaagtcagtgtggacatttgttgaccagcttaggggttcaaagccg
acgcggctcaattctccaggggatgggtgtgaagtcatcggaagatatgataacaagggt
ctttttccatatgaaagttttgtgaagcttcataactggaagaatgaattgcgtccattt
ggccttgtaaattgtggtaacagctgctacgctaatgctgtccttcagtgtctggcattt
actccaccgctaacatcctattttcttcaagggctccactctaaaacatgtgaaaagaaa
ggatggtgcttcacgtgcgaattcgaacatctagttctaaaagcaaaggatgggatctct
cccctatctcctagtagtataatttcccacctcgaaagcatcgggagcaatcttggtaat
ggtagagaagaagatgcacatgaatttcttaggtatgttatcgacacaatgcaatccatt
tgcttgaaggaagctggggttactgcacctggctctttcgaagaagaaacgagtctcgtg
gggcttacatttgggggctatcttcgttcaaagattgagtgcatgagatgcgggggcaaa
tctgagaggcaagagagaatgatggatcttactgttgaaatagacggagatataggcacc
ttggaggatgctttaaaacaatttactcacactgagactctagatggtgaaaacaagtac
cgatgtggcagatgtaaatcatatgagaaggccaagaaaaagttgaaagtgctggaggct
cctaatgtcctgactattgccttaaagagatttcagtcaggtaaatttggcaagctgaac
aagacaattaaattcccagagattctgaacctggcaccatatatgagtgggacaagtgat
aagtcaccagtttaccagctttatggagtcgtggttcacctggatgtaatgaatgctgca
ttttctggtcactatgtgtgttatgtgaggaacttccagaataagtggtacaaagttgat
gatagttcggtaagatctgtggaacttgaaagtgtcttatcgaagggagcatacatgctt
ctctattcacggtgctcgccacgggcccccagaataatgaggagtttgacaattcctcgc
gatccaaggagatcaaagcaattgacttgtaaatcaagatcccatacaagaagtccatgg
gactcttctcatggcgattcagctgctcaaacttgcaacgaatgttcttatcctagtcat
acaagtgtcaggccgagtaggtcaatatttgaggatgactcttcgagtgaacaatcctct
ttcttctccgagcatggttcttgcagcacagacagcactaacagggattcaatgagcacg
gatgacttaaatattgatatatttggggagtctggaagcagttggagttatcccatgagg
agttcatctgattctgacacatcatcttcctcatcttctccttcccctctgtactcgagg
cattcaccccttgctgatttggaccgttatgcttctgcgcacgaagagaccacttgcagt
tacggcggcaatgcagaagcagttggggatggtcagggtttttggacagggttacctgat
cggatcgggtatgctgcggttcctgaaagcaatggaaggacaccttctctctgtcccaac
tcaactaagcattgtagaaaagtagttagtagtcatagtagtagtaagaccgactccagt
agattaggtcgggttaacccatgtgacaagtcgaaatctcctgtaacttgtagagatcga
tga
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integrated database retrieval system
