Lycium barbarum (goji berry): 132627654
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Entry
132627654 CDS
T09483
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
132627654
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
132627654
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
132627654
NCBI-ProteinID:
XP_060199100
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Position
2:complement(141065448..141071522)
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AA seq
666 aa
AA seq
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MNISSWQLLQVLFCIMIVSNHSQISTRVLQLLQQEDQVVIDNGIFQLRLTNPGGNIIGIQ
YNGIENLLELNNPSLNGGFWDLNWSVPGTAGTRGKFDKIEGNSFKVIMETAEQIELSFTR
TWNPSLQGEHSPLNIDKRFIVLRDSPGFYSYAIYEHKEDMPEFNLNEARIAFMLSIEKFR
YMAMEDDRQRLMPLPKDRVPPRGKELAYPEAVLLVDPVEPEFKGEVDDKYQYSCENKDNK
VHGFICLDPPVGFWQITPSNEFRTGGPIKQDLTSHVNPTTLAMFVSTHYGGEDFVIKFGS
GEPWKKVFGPVFIYLNTVSDKNDARSLWDDAKERMHREVDSWPYSFPSSEDFPKADQRGN
IHGRLVVSDRYISKEYLSAKGAFVGLAPPGDAGSFQRECKGYQFWTNSDDEGYFSIQNVR
PGNYNLYAWVSGFIGDYRYEKSIAITAASDVDTGEIVYEPPRSGPTLWEIGIPDRSAAEF
YIPEPNPQYINKLFINQPTNRFRQYGLWERYADLYPDQDLVFTVGSSDYRKDWFYAQVTS
RKIGDNTYKPTTWKIKFNLDSIDQTGNYTLRIALSSATFSILEVRVNEEEANPPHFSSGL
IGSDNTIARHGVHGLYWLFSVEVTARQLLQGENIIYLKQERSFSALHGIMYDYIRLEAPP
LSAMHY
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttctagctggcagctgctgcaggttctgttttgcattatgattgtgtcaaac
cattcacagatatcaacccgagttctacagcttcttcagcaagaggaccaagtggtaata
gataatggcatattccaactaagattgacaaatccaggaggaaatatcattggtattcaa
tataatgggattgaaaatctactggagctcaacaacccaagcttgaatggagggttctgg
gacttaaattggagtgtacctggaactgctggaacaagaggaaaatttgataagatcgaa
ggtaatagttttaaagttattatggaaactgcagaacaaatagagctctcatttacaagg
acatggaatccttcacttcagggcgagcattccccgttaaacatagacaaaaggttcata
gttcttcgggattcgcctggtttttactcttacgccatttatgaacacaaagaggatatg
ccagaattcaacctcaatgaagccaggatagctttcatgctgagcatagaaaagtttcgg
tacatggctatggaagatgataggcaaaggctaatgcctcttcctaaagatcgtgtacct
cccagagggaaggaattagcatatccagaagcagtcctgctagtcgatcccgtggagcca
gaatttaaaggagaagttgatgacaagtatcagtattcgtgtgagaacaaagataacaaa
gtccatggcttcatttgcttagaccctccagtgggattctggcaaattactccaagcaat
gagttcagaactggtggacctatcaaacaggatcttacttcccatgttaatccaacaact
ctggctatgttcgtgagcactcattatggaggcgaggatttcgtgattaaatttggatca
ggcgaaccatggaagaaagtttttggacctgtttttatatatctcaatactgtatcggac
aagaatgatgcacgttccctttgggatgacgcgaaggaacggatgcacagagaagtcgac
tcttggccttacagtttcccgagttcagaagattttccaaaagccgaccaacggggtaac
atccatggtagattagtagtcagtgacaggtatataagtaaggaatatttgtctgcaaag
ggtgcttttgtcgggctagctccacctggagatgctggatcatttcaaagagaatgcaag
ggctaccaattctggacgaactcggatgatgaaggttatttctcaatccaaaatgtccgt
cctgggaactataacctctatgcttgggtatcaggcttcattggagattacagatacgaa
aaatccattgcaattactgcagcttctgatgttgataccggtgaaattgtgtacgagcct
ccgaggagtggtcctacattatgggaaatcggtattcctgatcgttctgcggcagaattc
tacattcctgaacctaatccacagtatattaacaaattattcataaatcaaccaacaaac
aggtttaggcagtatggattatgggagagatatgccgatttatacccagatcaagatttg
gtttttacagttggaagtagtgactatagaaaagattggttctatgctcaggtgacgagc
agaaaaattggtgataacacatataaacctacaacgtggaaaattaaattcaatttagat
agcattgatcagactggaaattacacactgcgaattgcgctctcgtctgcaactttctct
atattggaggtaagggtgaatgaggaagaagcaaatccaccacatttctccagtggatta
ataggaagtgataatacaattgccagacatggagtccatgggctgtattggctgttcagt
gtggaggtaactgcaagacaactccttcaaggtgagaatatcatatatctcaaacaagaa
aggagcttcagtgctctccatgggattatgtatgactatattcgtctggaagctcctcct
ctgtccgccatgcattattag
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