Lycium barbarum (goji berry): 132627656
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Entry
132627656 CDS
T09483
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
132627656
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
132627656
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
132627656
NCBI-ProteinID:
XP_060199108
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Position
2:complement(141085725..141098279)
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AA seq
639 aa
AA seq
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MTATGVQLHLPDDHHVVLDNGILQVTLSVPDGIVTGITYNGVNNLLEVLNDETNRGYWDV
VWSSPGTTGTTGIFEMLICTTYKVILETDDQIELSFSRTWDVSLQDELIPLNIDKRFIML
KGSSGFYSYAIYEHLEGWPGFNLDETRIAFKLRKDKFHYMAMADNRQRYMPLPDDRLPDR
GQPLAYPEAVLLVNPIEPEFKGEVDDKYQYSSEDKDLKVHGWICMDPSLGFWIIIPSDEF
RSGGPLKQNLTSHVGPTALSVFLSAHYAGEDLVPKFGQGEPWKKVFGPVFIYLNSVTKGE
DPLTLWEDAKRQMLIEVQSWPYSFPSSEDFSSSSQRGNISGRLLVLDRYFKDDKISASGA
YVGLAPLGEAGSWQRECKDYQFWKRADGDGNYVISNIRAGDYNLYAFVPGFIGDYKSDTK
VTITSGCSIEMDNLVFEPPRNGPTLWEIGIPDRSAREFYIPDPDPKYVNKLFVNHPDRFR
QYGLWERYADLYPNGDLVFTIGENDYKKDWFFVQVTRKMDEKTYQGTTWQIKFKLDSVNQ
NEIYTLRLALASTAQAELQVRVNDPSTNTPLFSSGVIGKDNAIARHGIHGLYWLFNVNLQ
GTILIEGINTIFLTQANATSPFQGIMYDYIRLEGPPSHD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgactgctactggagtacagttacaccttcccgatgatcaccatgtggtgctggataat
ggtattctccaagtgacattatcagtaccagatggcattgtaacgggaatcacatacaat
ggcgtcaataatttgcttgaggttctaaatgatgaaacaaatagagggtactgggatgtt
gtttggagttcaccagggactaccggaactacaggaatatttgaaatgctcatatgcaca
acctataaggtcatattggaaacagatgatcaaatagagctgtccttctcaaggacatgg
gatgtgtcgctacaggacgaacttattcccctgaacatagacaaaaggtttataatgctt
aaaggttcctcaggcttctattcttatgcaatttatgaacatttagagggatggcctggt
ttcaaccttgatgagactaggattgcattcaagctcagaaaagacaagtttcattacatg
gctatggcagataacaggcagagatacatgcccttacctgatgacaggttaccggataga
ggacaaccacttgcttatccagaagcagtcctgcttgtcaatcctatcgagcctgaattc
aaaggcgaggttgatgacaagtatcagtactcaagtgaggacaaagatctgaaggtccat
ggatggatttgtatggatccatcgctaggattctggattattattcccagtgacgaattt
cgatctggaggaccccttaaacaaaacctcacttctcatgtcggtccaactgctctttct
gtgtttctgagtgctcattatgcaggtgaagatttggttccaaaatttggacaaggggag
ccatggaaaaaagtctttggaccagtttttatatacctaaattctgtcactaaaggggag
gatccccttactctctgggaggatgctaaaagacagatgctgatagaagttcaaagctgg
ccttacagtttcccatcctctgaggatttttcatcatcatctcaacgcggtaatattagt
ggaagattgttagtactagacagatacttcaaagacgataagatatctgcttctggtgca
tatgttggcttagctccactaggagaagccggttcgtggcaaagagaatgcaaggactac
caattctggaaaagagcagatggggacggcaattatgtaataagtaatatacgagcaggc
gactataacttgtatgcatttgtccctggattcattggagattacaaaagtgacactaaa
gttacaattacctcaggctgcagcattgagatggataatcttgtctttgagccgccaaga
aatggacctacgctttgggaaattggcattcctgatcgttctgctcgagagttttatatt
cccgatccggatccaaaatatgttaacaaactctttgttaatcatcctgataggtttaga
cagtacggcctatgggagagatacgccgacttgtatccaaatggggatttagtctttaca
attggagagaatgactataaaaaagattggttctttgttcaagtcactaggaaaatggat
gagaagacatatcaaggaacgacatggcaaataaagtttaagcttgacagtgtaaatcaa
aatgaaatctatacactaagattggcacttgcatctacagctcaagctgaattacaggtt
cgcgtcaatgatccaagcacgaatactcctctattctcaagtggagtgatagggaaggat
aacgcgatagcaaggcatggaattcatggactatactggctgttcaatgtgaatttgcag
ggtactatacttattgaagggataaataccatatttttgacgcaagcaaatgcaactagt
ccttttcaagggatcatgtatgactatattcgtcttgaaggacctccttcccatgactaa
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