Lycium barbarum (goji berry): 132627657
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Entry
132627657 CDS
T09483
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
132627657
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
132627657
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
132627657
NCBI-ProteinID:
XP_060199111
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Position
2:complement(141078392..141083833)
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AA seq
638 aa
AA seq
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MAPGVQLHLHDDHHVVMDNGTLQVTLSVPDGIVTGITYNGVDNLLEVLNDEQNRGYWDVV
WSSEGSTGTTGTFERLICTTYKVILETDDQIELSFSRTWDVSLQDKLIPLNIDKRFLMLR
GSSGFYSYAIYEHLEGWPGFNLDETRIAFKLRKDKFHYMAMADNRQRYMPLPDDRLAGRG
QPLAYPEAVLLVNPIEPEFKGEVDDKYQYSCEDKDLKVHGWICMDPSLGFWIIIPSDEFR
SGGPLKQNLTSHVGPTALSMFHSAHYGGEDLVSKFGQGEPWRKVFGPVFIYLNSVDAGED
PLTLWEDAKIKMLIEVQSWPYSFPASEDFPSSSQRGNISGRLLVLDRYFNDDKISASGAY
VGLAPPGEAGSWQRECKDYQFWTRADEEGNYVISDIRAGNYNLYAFVPGFIGDYKSDIKV
TISSGCNIEMDDLVFEPPRNGPTLWEIGIPDRSAREFYIPDPDPKYVNKLFVNHPDRFRQ
YGLWERYTELYPNGDLVYTVGESDYKKDWFFAQVTRKKDEKTYQGTTWQIKFKLDNVNQE
EIYTLRLALASAAQAKLQVRVNDPSTNTPLYSSGVIGKDNAIARHGIHGLHWLFNVNLEG
TILVEGENTIYLTQANATSPFQGVMYDYIRLEGPPSHD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggctcccggagtacagcttcatcttcacgacgatcaccatgtggtgatggacaatggt
actctccaagtgactttatcagtaccagatggcattgtaactggtatcacatacaatggc
gtcgacaatttgcttgaggttctaaatgatgaacaaaacagaggatactgggacgttgtc
tggagttcggaaggatctacagggactactggaacatttgaaaggctcatatgcacaacc
tataaggtcatattggaaacagatgatcaaatagaactgtctttttcaaggacatgggat
gtgtcgcttcaggacaagcttattcccctgaacatagacaaaaggtttctaatgcttaga
ggttcctcaggcttctattcttatgcaatttatgaacatttagagggatggcctggtttc
aaccttgatgagactaggattgcattcaagctcagaaaagacaagtttcattacatggct
atggcagataacaggcagagatatatgcctttacctgatgacaggttagcgggtagagga
caaccacttgcttatcccgaagcagtcctgcttgtcaatcccatcgagcctgagttcaaa
ggcgaggtggatgacaagtatcagtactcatgtgaggacaaagatctgaaggtccatgga
tggatttgtatggatccgtcgctaggattctggattattattcccagtgacgaatttcga
tctggaggaccccttaaacaaaacctcacttctcatgttggtccaactgctctttctatg
tttcacagtgctcattatggaggagaagatttggtttcaaagtttggacaaggggagcca
tggagaaaagtctttggaccagtttttatatatctgaattctgttgatgcaggggaggat
ccccttactctctgggaggatgctaaaataaagatgctaatagaagttcaaagctggcct
tacagttttccagcctctgaggattttccgtcatcgtctcaacgtggtaatattagtgga
agattgttagtcctagacagatacttcaacgatgataagatttctgcttctggggcatat
gttggcttggctccaccaggagaagccggttcatggcaaagagaatgcaaggactaccaa
ttctggacaagagcagatgaggaaggcaattatgtaataagtgatatacgagcaggcaac
tataacttgtatgcatttgtccctggattcatcggagattacaaaagtgacattaaagtt
acaattagctcaggctgcaacatcgagatggatgatcttgtctttgagcctccaagaaat
ggacctacactttgggaaattggaattcctgatcgttctgctcgagagttctacattcct
gatcctgatccaaaatatgttaacaaactctttgttaatcatcctgataggtttagacag
tacggactatgggagagatacactgaattgtatccaaatggagatttagtctatacagtt
ggagagagtgactacaaaaaagattggttctttgctcaagtcactaggaaaaaggatgag
aagacatatcaaggaacaacatggcaaattaagtttaaactcgacaacgttaatcaagag
gaaatatatacactaagattggcactggcatctgcagcccaagctaaattacaggtacgc
gtcaatgatccaagcacgaatactcctttatattcaagtggagtgatagggaaggataac
gcgatagcaaggcatggaattcatggactccattggctgttcaatgtgaatttggagggt
accatacttgttgaaggggaaaataccatatatttgacacaagcaaatgcaactagtcct
tttcaaggggtcatgtatgattatatccgtttagaaggacctccgtcccatgactaa
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