Lycium barbarum (goji berry): 132627658
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Entry
132627658 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132627658 isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
132627658
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
132627658
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
132627658
NCBI-ProteinID:
XP_060199112
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Position
2:complement(141099270..141108058)
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AA seq
669 aa
AA seq
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MGHRRNFKRMIKCLCACAGQIGACCHSGGPGTMSPIGVRLYIQDRHVMMDNGLVQVTLSN
PEGIVTGIRYNDVDNLLEVLNDESNRGYWDVVWNSPDVGKTGVFEVIKGTNFKVIKETDD
QVEISFSRPWDPSLQGKLVPLNIDKRFILLRGCSGFYSYAIYEHVGSPEWPAFSLGETRI
AFKLRKDKFHYMAVADNRQRFMPLPDDRMPARCQRLAYAEAVLLTNPVEPELRGEVDDKY
QYSCDNKDNKVHGWISMDPPVGFWQITPSDEFRSGGPVKQNLTSHVGPTTLAMFLSSHYA
GDDLTPNVAQGEAWKKVFGPVFIYVNSVMQGEDPVTLWDDAKIQMQHEVQSWPYSFPASE
DFLSADQRGSASGRLLVQDKYISDDNIPANGAFVGLAPPGGAGSWQRECKDYQFWANVDN
NGYFSINNIRPGDYNLYAWVPGFIGDYLYETPISITPGCGIDVDEIVYQPPRDGPTLWEI
GIPDRTAAEFFVPEPNPKFFNKLFVNHPDKFRQYGLWDRYTELYPKDDLVYVAGESDYRK
DWFFAQVPRRKEDGTYQGTTWQIRFKLDSVNQGGTYKLRIAIASATLAEVQVRVNNPSTN
RPLFTTGLIGRDNSIARHGIHGLYWLYSIDIQGNMLVQGDNTIYLGQPRNQSPFQGIMYD
YIRLEAPSN
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatcggcgtaatttcaaacgcatgataaaatgtttatgcgcgtgcgcaggacaa
ataggagcttgttgtcatagtggaggtcctggaacaatgtcccctattggagtgagattg
tacattcaggatcgccatgtgatgatggataatggcctagtccaagttacgttatcaaat
ccagagggaattgtcactggaatacgttataatgacgttgataatctacttgaagtcctt
aacgacgaatccaatagagggtattgggacgttgtctggaattctccagatgttgggaaa
actggagtatttgaagtgatcaagggtactaatttcaaggttataaaggagacagacgat
caagtagagatatcattttcacgaccatgggatccctccctccaaggcaaacttgtcccg
ctaaatattgacaaaaggtttattttgctccgtggctgctctggtttctactcttatgcc
atttatgagcatgtcggttcacctgagtggcctgctttcagccttggtgaaactagaata
gcattcaagctccggaaagataagtttcactacatggctgtggcagataatagacaaaga
ttcatgcctctaccagatgaccgaatgcctgcaagatgccaacgccttgcctatgcagaa
gcggtcctattgaccaatcctgtggagcccgagctaagaggagaggtcgatgacaaatac
cagtattcatgtgataataaagacaacaaggtccacggttggatatctatggatccacca
gtgggattctggcaaattactccgagtgatgaatttcgatccggtggacctgtcaaacag
aaccttacatcccatgtcggtccaactaccctagctatgtttctaagctctcattatgct
ggggatgatctaacaccaaatgttgctcaaggcgaagcctggaagaaagttttcggcccc
gtgtttatatatgttaattctgttatgcaaggggaggatcctgttactctatgggatgat
gccaagatacagatgcagcatgaagttcaaagctggccttacagttttccagcatcggaa
gattttctatcagcagatcaaaggggcagtgctagtggtagacttttggttcaagataaa
tacattagtgatgataatataccagcaaatggcgcttttgttgggcttgctccaccagga
ggggctggttcctggcaaagagaatgcaaggactaccaattttgggctaatgtagacaat
aatggatacttctccataaacaatatacgtcccggtgattacaatctttatgcatgggta
cctggattcattggggactatctatatgagactcccatctccataactccaggttgtggt
attgatgtggacgaaatcgtatatcaacctccaagggacggccccacattatgggaaata
ggcattcctgatcgtactgctgcagaattttttgttcctgaacccaacccgaaatttttc
aacaagctttttgtcaatcatcctgacaagtttaggcaatatggattgtgggataggtac
accgaattatatccaaaggatgatcttgtgtatgtagctggagaaagtgactatagaaaa
gactggtttttcgctcaggttccaaggagaaaagaggatggcacatatcaaggaacaacg
tggcaaatcagatttaaacttgattcagtcaatcaaggaggaacatataaattgcgcatt
gcaattgcatctgcaactttagctgaagtgcaggttcgggtgaataatccgagcacaaac
cggcctctatttacaacgggattgattggaagagataactcaattgctaggcatggaatt
catggactatattggctgtacagtatagacatacagggaaatatgctagtgcaaggggac
aacaccatttacttaggccaaccaagaaaccagagtcctttccaggggattatgtatgac
tatattcgtcttgaagcgccatcaaactaa
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