Lycium barbarum (goji berry): 132627689
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Entry
132627689 CDS
T09483
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbb03041
]
132627689
Spliceosome [BR:
lbb03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
132627689
Other components
Complex C specific factors
132627689
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Mis12
Motif
Other DBs
NCBI-GeneID:
132627689
NCBI-ProteinID:
XP_060199153
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Position
2:142179654..142187746
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AA seq
862 aa
AA seq
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MDDDQEMERFGMENDYEDGQWISGEFYYRKRKEKKHVQTKDDVLYGVFASGDSDSDYEGS
SKKRKKGLSTKPDLTKPVNFVSNGTVMPNQEIDQNTKEENDQLISEESKGLGFGASVGLG
FGTSSTNNNADEEYIKTAAQVETDGENFLPSAFGRKIKEGALRREKEKEKEKSMLAKKSS
ESGRREPGGDVGGFEKYTKGIGKKLLEKMGYKGGGLGRNQQGILAPIEAKLRPKNMGMGF
NDYKEASAPALQESEGKPVACPPQPVEGRSKEKLWSKQAKKVKKAYITAEELLAKKQEQG
LEIIQKVFDMRGPQVRVLTNLENLNAEEKARENDVPMPELQHNIMLIVDLAELDIQKIDS
DLRNEREAVVALQKEKEKLQAEAARQKRQFDNMEEIVSVLDRIGGESTSGTLTLDSLAKA
FADLQQQYAEEYKLCNLSSIACSYALPLFIQVFQEWDPLQTPTHGLEVVSLWKNLLQGDD
IFTISDAASPYTQLFMEVVFPAVRISGTNTWQARDPEPMLRFLDSWEKLLPPAVLQTILE
NIVLPKLSAAVNSWDPRRETIPIHSWVHPWLPLLGQRLESCYHTIRNRLESVLHAWHPSD
MSAYYILSPWKTVFDAINWEKLMVRFIVPKLLAVMHEFQINPANQNLDQFYWVRTWATAI
PIHHMLPILDIFFNKWQEVLYHWLCSNPNFEEVTKWYLGWKELIPPELQANEHVRYRLNL
VLEMMNQAVEGLEVVQPGLRENISYLRVLEQRQFETQKKAAAQAQSRPFVGSNSGTQMDG
TGGGVYMSVKEIVEVHAQQNGLLFKPKPGRMQDGHQIYGFGNISIIIDSLNQKVFAQVED
RWSLVSLEQLLDLHNRSGLKRR
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatcaggaaatggaaaggtttggaatggagaatgattatgaagatggtcag
tggatcagtggtgaattctactatcggaagcgcaaagaaaaaaagcacgttcaaaccaag
gatgatgtcctctatggtgtttttgcttctggggatagcgactctgactatgagggatcc
tccaagaagcgcaagaaaggactttccacgaagcctgacctcactaaacctgttaatttc
gtctcaaatggaactgtcatgcctaaccaagaaattgatcagaataccaaagaggaaaac
gaccagctaatatcagaagagagcaaaggtttgggatttggggcatctgttggccttgga
tttggtactagttccaccaataataatgctgatgaggaatatatcaagacagcagcccag
gttgaaactgatggggaaaactttctgccgtctgcttttggtaggaagatcaaagaaggt
gccctaagacgtgagaaggaaaaggaaaaggagaagtctatgttggccaagaaatcttct
gaatcagggagaagagaacctggtggtgatgttggtggctttgagaagtataccaagggg
attgggaagaaattgcttgagaagatgggttataagggaggtgggttgggtagaaatcag
caaggaattttggctccgatcgaggcaaagctaaggcccaagaatatgggaatgggtttc
aatgactataaggaggctagtgcaccagctcttcaagaatcagaaggaaagcctgttgct
tgtcctcctcaacccgtggaaggccgctcaaaagagaagctttggtcaaagcaagctaaa
aaagtgaagaaggcttacattacagctgaagagttgttagccaaaaagcaggagcagggc
ctggaaattattcagaaggtctttgatatgaggggtccacaggttcgagtcttgacgaat
ctggagaatttgaacgctgaggaaaaagcaagggaaaatgatgttccaatgcctgaactt
cagcacaatatcatgttgattgtcgatttggcagaacttgacatacaaaaaattgatagt
gatttgagaaatgagagggaggcagttgttgctttgcagaaggagaaggagaagctccaa
gctgaggcagctcgccaaaaaaggcagtttgataatatggaagagattgtcagtgtattg
gaccggatagggggagaaagcacatctggtaccctgaccctagactcccttgcaaaagca
tttgcagacttgcaacagcagtatgctgaggaatacaaactctgcaacttgtcaagcata
gcgtgctcatatgctctgcctttatttattcaagtttttcaggaatgggatccacttcaa
actccaacacatggattggaggtggtttccctgtggaagaaccttttgcaaggggatgac
atttttactatctctgatgccgcatctccttatactcaactatttatggaagttgtattc
cccgctgttagaatatctggcaccaatacctggcaggcaagggaccctgaaccaatgctt
cgttttttggattcttgggagaagctgttgcctcctgcagtccttcagacaatactggaa
aacattgttttgcccaagttatcagctgctgtgaactcctgggatccacgtcgagaaaca
attccaatccattcctgggttcatccatggttgcccttgctgggtcaaagattggaaagc
tgctatcacactatacgtaacagattggaaagtgtcttgcatgcttggcacccaagtgat
atgtctgcatactacatattgtctccttggaagactgtgtttgatgcaattaactgggaa
aagctgatggtccggtttattgttccaaagttgttagcagtgatgcatgaattccaaata
aatccagcaaatcagaaccttgatcagttctattgggtccgtacttgggctactgctatt
cccatccatcacatgcttccaatactggatatattcttcaacaagtggcaagaggttttg
taccactggttatgctcaaacccgaactttgaagaagtgacgaaatggtatttgggttgg
aaggaacttattccacctgaacttcaggcaaatgaacacgttcgctatcgacttaatctt
gttctagaaatgatgaaccaggctgttgaaggcttggaggttgttcagcctggtttgagg
gagaacattagttatcttagggttcttgaacaaaggcagtttgagactcagaaaaaagct
gcagcacaagctcaatcccgtccttttgtgggctcgaacagtggtacccaaatggatggt
acaggtggtggggtttacatgagcgtgaaagaaattgttgaagttcatgctcaacagaat
ggtttgctgttcaagcctaagcccggcaggatgcaagatggtcatcagatatatggtttt
ggtaacatcagcattattatagattctctcaatcagaaggtgtttgcgcaagttgaggac
aggtggtctttggtatcacttgagcagctgttggatctgcataatcgatctgggttaaag
cgccgataa
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