Lycium barbarum (goji berry): 132627787
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Entry
132627787 CDS
T09483
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132627787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132627787
03036 Chromosome and associated proteins [BR:
lbb03036
]
132627787
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132627787
Coactivators
SAGA/TFTC/STAGA complex
132627787
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
132627787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
ParG
Motif
Other DBs
NCBI-GeneID:
132627787
NCBI-ProteinID:
XP_060199345
LinkDB
All DBs
Position
2:144272808..144283882
Genome browser
AA seq
921 aa
AA seq
DB search
MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIGGDNSQSQPSDSDSVPLSQGSSYTSN
QFAPWPTSNHDENASRHSLQDSETMQQKEENSQNQQQKNDSSQEINSLPLQHISQDSYQT
TEVDQDTLHSSKAVNMQNPAKNTQNPESQHVNLQGANNQPSVQSLTTGTSGLPRVAAEAS
NQSESATGPSSQAAINVAKQGKQVPFAMLFPHIQPQLDKDRAMQLQTLYLKLKKNEISKE
GFVRHMRSIIGDQMLKMAVYKFQSQASKTSQTAPGQFPQSQASQQQHPQMPADDSSNMAI
ESNAQKLHEVENQSDMRGVPGSQMPSSSLTAVKQERDRSPFPVQGLNRQQQQHLHFSQAS
FPTFSNAGNNYSTYSASNVNSSATQSLKQQSDDAQMRQLSAQQNRNATQFGVPTQAMGMT
SAPKFEKHNTFGEAKRFPSGNLTIPSTSRIQQTSVQWQQSANKEQKSFLSSPMTNPKPEP
IDHFHDQPQRSQLSHFPSVQVDQGNSTSESSKDESIEQTSRIGLSTTTSMKPSNSASSSM
SSQMDTSTLLSSRPPSVTSPLGPGNNGKTPVKKPSIGQKKPLDALGSSPPPSGKKQKVSG
AFLDQSIEQLNDVTAYSGVNIREEEEQLFSGPKEDSRVSEASRRVVQEEEEKLILQKIPL
QKKLTETMAKCGLKNMSSDVERCLSLCVEERIRGLISSLIRLSKQRVDIEKSRHRTIVTS
DVREEIMSINRKAREEWEKKQADVEKLQKANEPEGSIGVDGDKEKDDGRGKSIKVNKEED
DKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGGGDVASGSQPGKDVTRKNLSAP
TRSSRDHQGAEKRSQSSAIATTGAVRRAGRNQGITQTRIARSITVKDVIAVLEREPQMSK
STLIYRLYEKARSNASLAESS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctatcatgaaactcctcgaagaagacgaggatgaaacaatgcattcaggt
gccgatgtggaggcatttactgctgccctaaatagggatattggtggagataattcacaa
tctcagccttcagattccgatagcgtaccattgtctcaaggaagcagctatacctcaaat
cagtttgccccatggccaacttctaaccatgacgaaaatgccagtcgtcatagccttcaa
gattcagagaccatgcagcaaaaggaggaaaattctcagaatcagcagcaaaaaaatgac
tcctcacaggagatcaattcccttccattgcagcatatatcccaggatagttatcaaacc
acagaggttgaccaagacacacttcattcttctaaagcagtgaatatgcagaatcctgca
aagaatactcaaaatccagaatctcaacatgtaaacttacagggagcaaataatcaacca
tccgtgcagtccttgacaacaggaactagtggtctgccacgtgtggcggcagaggcaagt
aatcagtcagaatcggcaactgggccgagtagccaagcagcaatcaatgtagctaaacag
ggtaaacaagtgccttttgccatgcttttccctcacatacaaccccaacttgataaggac
agggcaatgcaactccaaactctttaccttaaactcaagaaaaatgaaatttccaaggaa
ggttttgtaagacacatgagaagtataattggtgaccagatgctcaagatggctgtatat
aaatttcaatctcaggcatctaaaacctcacagactgcccccggtcaattccctcagtct
caggcttcacagcagcaacatccgcagatgccagccgatgattctagcaatatggcaatt
gagagtaatgctcaaaagttgcacgaagtggaaaaccaatccgatatgcgtggagtccca
ggaagccagatgccttcttctagtttgaccgctgtaaaacaagagagggatcgctcacca
tttccagttcagggactcaataggcaacaacaacagcatttgcacttctcacaggcatct
tttcccacattttcgaatgcagggaacaattacagtacatattctgcatctaatgtcaac
tcttcagcaacacaatctcttaaacagcaatctgatgatgcacaaatgagacaactttca
gctcaacagaacagaaatgcaactcagtttggagtgccaacacaggctatgggaatgacg
agtgctcctaagtttgaaaagcacaacacttttggcgaagccaaaagatttcctagtggg
aatcttactattccaagtacttcaagaatccagcagacttcagttcagtggcaacagtct
gccaataaagagcagaaaagttttctttcatcaccaatgaccaatccaaagcctgaacca
attgatcatttccatgaccagccacaaagatcccagttatcgcacttcccctctgttcaa
gtggatcaaggaaattccacttcggaaagttcaaaggatgaatctattgaacagacctcc
agaattggtttatcaacaaccactagcatgaaaccttcaaattcagcttcgtcttccatg
tcatctcaaatggacactagcacattgttaagttctcggccaccttctgtgacatctcca
cttgggccaggaaacaatggaaagactcctgtgaaaaagccttccattggacagaagaag
ccccttgatgcgctaggttcctcgcctcctccttcgggaaagaagcaaaaggtgtcagga
gcttttttagatcagagcattgaacaacttaatgatgttactgcttatagtggagttaat
ataagggaagaggaagaacagctattttctgggcccaaggaggatagtcgagtttctgaa
gcatctcgccgagttgtgcaagaagaagaggaaaagctgattttgcagaaaattccactt
cagaagaaattgaccgaaaccatggcaaaatgtggtttaaagaatatgagcagtgatgtg
gaacgatgcttgtcattgtgtgtggaagaaagaattcgtggacttataagtagtctcatc
agactgtcaaaacagagagttgacattgagaagtcaagacacagaacaattgtcacctca
gatgttcgtgaagaaatcatgtcaatcaatcgaaaagcccgggaagaatgggaaaagaaa
caggctgatgtggaaaaactccagaaggcaaatgaacctgaaggtagtattggagttgac
ggtgataaggagaaggatgacggtcgcgggaaatcaataaaggtaaacaaggaagaggat
gataagatgcgaactacagctgcaaatgttgctgctcgagctgctgtcggaggggatgac
atgttgtcaaagtggcaattaatggctgagcaggccagacaaaagcgtgaaggtggaggt
gatgtggcttctggttcacagcctggtaaggacgtgactcggaagaacttatcagctccc
acaaggagctcaagggaccatcaaggagctgagaaaaggagccagtcatctgcaatagcc
acaactggtgctgtgagaagagctgggagaaatcaagggataacgcagactaggattgct
cgcagtattactgtaaaggatgtgatcgcggtcctagaaagagaacctcaaatgtctaag
tctacattgatataccgcttgtatgagaaagctcggtccaatgcttcattagctgaatca
tcctga
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